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AT1G62540.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.689
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : flavin-monooxygenase glucosinolate S-oxygenase 2
Curator
Summary (TAIR10)
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational
Description (TAIR10)
flavin-monooxygenase glucosinolate S-oxygenase 2 (FMO GS-OX2); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 1 (TAIR:AT1G65860.1); Has 12235 Blast hits to 11922 proteins in 1493 species: Archae - 60; Bacteria - 6240; Metazoa - 1058; Fungi - 1528; Plants - 820; Viruses - 0; Other Eukaryotes - 2529 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT1G62540-MONOMEREC:1.8.-.-eggNOG:COG2072eggNOG:KOG1399
EMBL:AC005698EMBL:AF370313EMBL:AY063099EMBL:CP002684
EnsemblPlants:AT1G62540EnsemblPlants:AT1G62540.1entrez:842551Gene3D:3.50.50.60
GeneID:842551Genevisible:Q94K43GO:GO:0004499GO:GO:0019761
GO:GO:0050660GO:GO:0050661GO:GO:0080102GO:GO:0080103
GO:GO:0080104GO:GO:0080106GO:GO:0080107Gramene:AT1G62540.1
gramene_pathway:1.1.1.-gramene_pathway:2.1.1.-gramene_pathway:PWY-1187gramene_pathway:PWYQT-4471
gramene_pathway:PWYQT-4472gramene_pathway:PWYQT-4473gramene_pathway:PWYQT-4474gramene_pathway:PWYQT-4475
hmmpanther:PTHR23023hmmpanther:PTHR23023:SF94HOGENOM:HOG000237857InParanoid:Q94K43
InterPro:IPR000960InterPro:IPR020946InterPro:IPR023753KEGG:ath:AT1G62540
OMA:LETNGYMPaxDb:Q94K43Pfam:PF00743Pfam:Q94K43
PhylomeDB:Q94K43PRIDE:Q94K43PRINTS:PR00370PRO:PR:Q94K43
ProteinModelPortal:Q94K43Proteomes:UP000006548Reactome:R-ATH-217271RefSeq:NP_564796.1
SMR:Q94K43STRING:3702.AT1G62540.1SUPFAM:SSF51905TAIR:AT1G62540
tair10-symbols:FMO GS-OX2UniGene:At.16347UniProt:Q94K43
Coordinates (TAIR10) chr1:+:23151870..23155427
Molecular Weight (calculated) 52105.70 Da
IEP (calculated) 5.81
GRAVY (calculated) -0.32
Length 457 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPAQNPISS QHVVVIGAGA AGLVAARELS REGHTVVVLE REKEVGGLWI YSPKAESDPL SLDPTRSIVH SSVYESLRTN LPRECMGFTD FPFVPRFDDE
101: SRDSRRYPSH MEVLAYLQDF AREFNLEEMV RFEIEVVRVE PVNGKWRVWS KTSGGVSHDE IFDAVVVCSG HYTEPNVAHI PGIKSWPGKQ IHSHNYRVPG
201: PFENEVVVVI GNFASGADIS RDIAKVAKEV HIASRASEFD TYEKLPVPRN NLWIHSEIDT AYEDGSIVFK NGKVVYADSI VYCTGYKYRF TFLETNGYMN
301: IDENRVEHLY KHVFPPALSP GLSFVGLPSM GIQFVMFEIQ SKWVAAVLSR RVTLPTEDKM MEDISAWYAS LDAVGIPKRY THKLGKIQSE YLNWVAEECG
401: CPLVEHWRNQ QIVRGYQRLV SHPETYRDEW DDNDLMEEAY EDFARKKLIS FHPSHIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)