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AT1G61050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.428
plasma membrane 0.422
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha 1,4-glycosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 493 Blast hits to 489 proteins in 121 species: Archae - 2; Bacteria - 96; Metazoa - 240; Fungi - 20; Plants - 92; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G61050-MONOMERCAZy:GT32eggNOG:ENOG4111PD8eggNOG:KOG1928
EMBL:AC018908EMBL:CP002684EMBL:KJ138957EnsemblPlants:AT1G61050
EnsemblPlants:AT1G61050.1entrez:842396GeneID:842396GO:GO:0016021
GO:GO:0016740Gramene:AT1G61050.1hmmpanther:PTHR12042hmmpanther:PTHR12042:SF18
HOGENOM:HOG000030686InterPro:IPR007577InterPro:IPR007652InterPro:IPR029044
KEGG:ath:AT1G61050KO:K01988OMA:CKFRFFMPfam:PF04488
Pfam:PF04572PhylomeDB:Q9C949PIR:B96636PRO:PR:Q9C949
Proteomes:UP000006548RefSeq:NP_176300.1STRING:3702.AT1G61050.1SUPFAM:SSF53448
TAIR:AT1G61050TMHMM:TMhelixUniGene:At.49991UniProt:Q9C949
Coordinates (TAIR10) chr1:+:22486736..22488043
Molecular Weight (calculated) 49968.00 Da
IEP (calculated) 10.72
GRAVY (calculated) -0.12
Length 435 amino acids
Sequence (TAIR10)
(BLAST)
001: MEQSRRTEQV LLVQRLKRLI VSFVFCLPMS LLGLLLMLLL IYNSFSVFSL HLVPNQPIQS TLSPTHLQIL HHQTSTSSSV SDSSLLLVVK ETSLGFIQKQ
101: NVSSTRIEKK TRRFKRSTEL TPAITQRLQV KSRQRFQTRV KSLLSKSSCE SLFFMTWISS IESFGDRERF TIESLFKFHP NGCLILVSNS FDCDRGTLIL
201: KPFTDKGLKV LPIKPDFAYI FKDTSAEKWF ERLKKGTLSP GVIPLEQNLS NLLRLVLLYK YGGIYLDTDV IILKSLSNLH NVIGAQTVDP VTKKWSRLNN
301: AVLIFDKNHP LLKRFIDEFS RTFNGNKWGH NGPYLVSRVI TRIKISSSSD LGFSVLPPSA FYPVDWTRIK GFYRAPTNES DAWLRKRLTH LRKNTFAVHL
401: WNRESKKLRI EEGSIIHQLM SHSCIFCNSS SLHLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)