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AT1G55200.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.570
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT3G13690.1); Has 111250 Blast hits to 110104 proteins in 4418 species: Archae - 103; Bacteria - 13376; Metazoa - 40845; Fungi - 8892; Plants - 32313; Viruses - 311; Other Eukaryotes - 15410 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G55200-MONOMEReggNOG:COG0515eggNOG:KOG1187EMBL:AC027034
EMBL:AY063963EMBL:AY096404EMBL:CP002684EnsemblPlants:AT1G55200
EnsemblPlants:AT1G55200.1entrez:841963Gene3D:2.60.120.200Gene3D:3.40.50.620
GeneID:841963GO:GO:0004672GO:GO:0005524GO:GO:0005886
Gramene:AT1G55200.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF152HOGENOM:HOG000030089
InterPro:IPR000719InterPro:IPR001245InterPro:IPR008266InterPro:IPR011009
InterPro:IPR013320InterPro:IPR014729KEGG:ath:AT1G55200OMA:VICMIHT
Pfam:PF07714Pfscan:PS50011PhylomeDB:Q9C890PIR:G96593
PROSITE:PS00109PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_175916.1
scanprosite:PS00109SMR:Q9C890STRING:3702.AT1G55200.1SUPFAM:SSF52402
SUPFAM:SSF56112TAIR:AT1G55200UniGene:At.27126UniGene:At.66851
UniProt:Q9C890
Coordinates (TAIR10) chr1:-:20589309..20592049
Molecular Weight (calculated) 75352.00 Da
IEP (calculated) 7.38
GRAVY (calculated) -0.36
Length 676 amino acids
Sequence (TAIR10)
(BLAST)
001: MSREKQGKRS GSNGTEKVLV AVKASREISK TAFVWALTHI VHPGDCITLI VVVTSYNAGR KLWTFPRFAG DCATGHWKLH SDPMSEIKSD LTDTCSQMIL
101: QLHDVYDPNK VNVRIKIVSG SPCGAVAAEA KKSQANWVVL DKHLKHEEKR CIDELQCNIV AMKRSEAKVL RLNLVGSSTK EPELASEKNK NRLLDSVKAV
201: VTTTPMSSPE VETSFTGTEA WTSSVSSSDL GTSSPVFTAE VRKDETLVVK ENESDSDSES ENLSLPSLSK RFQPWISEYL STHCVSMQES TRGDDKAVQV
301: STKKALLEKI SKLDEGEEAA MSSKRKDLEE YSGTLRALSR NAPPVSPPLC SICQHKAPVF GKPPRFFSYK ELELATNGFS RANFLAEGGF GSVHRGVLPE
401: GQIVAVKQHK VASTQGDVEF CSEVEVLSCA QHRNVVMLIG FCIEDTRRLL VYEYICNGSL DSHLYGRHKD TLGWPARQKI AVGAARGLRY LHEECRVGCI
501: VHRDMRPNNI LITHDYEPLV GDFGLARWQP DGELGVDTRV IGTFGYLAPE YAQSGQITEK ADVYSFGVVL IELITGRKAM DIYRPKGQQC LTEWARSLLE
601: EYAVEELVDP RLEKRYSETQ VICMIHTASL CIRRDPHLRP RMSQVLRLLE GDMLMNEISG RFNGRLSTEK GLRDHN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)