AT1G53530.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Peptidase S24/S26A/S26B/S26C family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B, conserved region (InterPro:IPR019759), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G29960.1); Has 5097 Blast hits to 5089 proteins in 1522 species: Archae - 0; Bacteria - 3881; Metazoa - 248; Fungi - 243; Plants - 276; Viruses - 0; Other Eukaryotes - 449 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:19978249..19979778 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 18783.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.95 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 168 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRMTFLSYLK QWRGTAKEAF ENVSIVAKFL CLLHVTDRYI ISTTHVHGPS MLPTLNLTGD VILAEHLSHR FGKIGLGDVV LVRSPRDPKR MVTKRILGLE 101: GDRLTFSADP LVGDASVSVL VPKGHVWIQG DNLYASTDSR HFGPVPYSLI EGKALLRVWP PEYFGSLR |
||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)