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AT1G51360.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : dimeric A/B barrel domainS-protein 1
Curator
Summary (TAIR10)
Involved in defense against fungal pathogens and located in cytosol.
Computational
Description (TAIR10)
dimeric A/B barrel domainS-protein 1 (DABB1); CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: Stress responsive alpha-beta barrel domain protein (TAIR:AT2G31670.1); Has 154 Blast hits to 154 proteins in 49 species: Archae - 2; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
DNASU:841560EMBL:AC006085EMBL:AK175329EMBL:AK176865
EMBL:BT010487EMBL:CP002684EnsemblPlants:AT1G51360EnsemblPlants:AT1G51360.1
entrez:841560GeneID:841560GO:GO:0005829GO:GO:0009620
GO:GO:0009753GO:GO:0009817Gramene:AT1G51360.1hmmpanther:PTHR33178
hmmpanther:PTHR33178:SF3HOGENOM:HOG000242441InterPro:IPR011008InterPro:IPR013097
KEGG:ath:AT1G51360ncoils:CoilOMA:TASDFTHPfam:PF07876
Pfscan:PS51502PhylomeDB:Q9SYD8PIR:F96551PROSITE:PS51502
Proteomes:UP000006548RefSeq:NP_175547.1SMART:SM00886STRING:3702.AT1G51360.1
SUPFAM:SSF54909TAIR:AT1G51360tair10-symbols:ATDABB1tair10-symbols:DABB1
UniGene:At.43203UniProt:Q9SYD8
Coordinates (TAIR10) chr1:+:19044208..19044840
Molecular Weight (calculated) 23653.10 Da
IEP (calculated) 4.46
GRAVY (calculated) -0.23
Length 210 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSIVEHVVL FKLNDDDVDS GKINSMVNGI NELVNLDQVL HLYCGSIHRL ITTTASDFTH VLHSRYRSKE DLNAYAIHPD HVRVVKESES IREDIMAVDW
101: IAEQAPEALA PPLGSIGKIT LLKLKENVME EAKLEIMEVM KEKFEGIDQI TVGENFSPGR SKDFSIGSIS YFRDLGEIEA VDDQMKLQND KIRDYVDDTI
201: VVEFNVPSSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)