AT1G51360.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : dimeric A/B barrel domainS-protein 1 | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Involved in defense against fungal pathogens and located in cytosol. | ||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
dimeric A/B barrel domainS-protein 1 (DABB1); CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: Stress responsive alpha-beta barrel domain protein (TAIR:AT2G31670.1); Has 154 Blast hits to 154 proteins in 49 species: Archae - 2; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:19044208..19044840 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 23653.10 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.46 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||
Length | 210 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSSIVEHVVL FKLNDDDVDS GKINSMVNGI NELVNLDQVL HLYCGSIHRL ITTTASDFTH VLHSRYRSKE DLNAYAIHPD HVRVVKESES IREDIMAVDW 101: IAEQAPEALA PPLGSIGKIT LLKLKENVME EAKLEIMEVM KEKFEGIDQI TVGENFSPGR SKDFSIGSIS YFRDLGEIEA VDDQMKLQND KIRDYVDDTI 201: VVEFNVPSSS |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)