AT1G49660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : carboxyesterase 5 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein with carboxylesterase whose activity was tested using pNA. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
carboxyesterase 5 (CXE5); FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G49650.1); Has 8816 Blast hits to 8793 proteins in 1471 species: Archae - 111; Bacteria - 5189; Metazoa - 410; Fungi - 728; Plants - 1374; Viruses - 5; Other Eukaryotes - 999 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:18378777..18379736 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35198.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.24 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 319 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESEIASEFL PFCRIYKDGR VERLIGTDTI PASLDPTYDV VSKDVIYSPE NNLSVRLFLP HKSTKLTAGN KLPLLIYIHG GAWIIESPFS PLYHNYLTEV 101: VKSANCLAVS VQYRRAPEDP VPAAYEDVWS AIQWIFAHSN GSGPVDWINK HADFGKVFLG GDSAGGNISH HMAMKAGKEK KLDLKIKGIA VVHPAFWGTD 201: PVDEYDVQDK ETRSGIAEIW EKIASPNSVN GTDDPLFNVN GSGSDFSGLG CDKVLVAVAG KDVFVRQGLA YAAKLEKCEW EGTVEVVEEE GEDHVFHLQN 301: PKSDKALKFL KKFVEFIIG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)