suba logo
AT1G48440.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:15574830 (2004): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : B-cell receptor-associated 31-like
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
B-cell receptor-associated 31-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17780.1); Has 105 Blast hits to 105 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IYRWeggNOG:ENOG410YZVQEMBL:AY085827EMBL:BT002443
EMBL:BT008440EMBL:CP002684EnsemblPlants:AT1G48440EnsemblPlants:AT1G48440.1
entrez:841265GeneID:841265GO:GO:0005783GO:GO:0006886
GO:GO:0016021Gramene:AT1G48440.1hmmpanther:PTHR12701hmmpanther:PTHR12701:SF20
HOGENOM:HOG000239460InterPro:IPR008417KEGG:ath:AT1G48440OMA:CILFALE
PANTHER:PTHR12701PhylomeDB:Q8LDS7Proteomes:UP000006548RefSeq:NP_564527.1
TAIR:AT1G48440TMHMM:TMhelixUniGene:At.15305UniGene:At.27162
UniProt:Q8LDS7
Coordinates (TAIR10) chr1:+:17907075..17908327
Molecular Weight (calculated) 14978.60 Da
IEP (calculated) 8.70
GRAVY (calculated) 0.32
Length 129 amino acids
Sequence (TAIR10)
(BLAST)
001: MALQWLILSY VVAVEVVITL VLTLPYPMLL KKRVVQLVSL ILQPAASIVA FAGFQLLDIY WKAEHRLSCS SEVCTATERD RYEKSIYKAQ RNVVLCAAGI
101: LLYWCIYRIC KYNKDLERLE ATEKRFKEE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)