AT1G29840.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.929 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: BAAT/Acyl-CoA thioester hydrolase C-terminal (InterPro:IPR014940); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G47560.1); Has 3003 Blast hits to 3000 proteins in 773 species: Archae - 49; Bacteria - 1594; Metazoa - 6; Fungi - 71; Plants - 182; Viruses - 2; Other Eukaryotes - 1099 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:10445735..10447422 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 29566.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.24 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||
| Length | 263 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDSSQGISAT TQQKIVILNS NNEKLVGLLH ETGSTEIVVL CHGFRSTKND QVMKNVAAAI EKEGISAFRF DFSGNGESKG SFYFGNYNYE ADDLHSVIRY 101: FTNMNRVVPI IIGHSKGGDV VLVYASKYQD IRNVINLSGR YDLKRGIGER LGEDYLERIK QQGFIDIKEG NAGFRVTEES LMERLNTDMH EACLKIDKEC 201: RVLTVHGSAD EVIPLEDAKE FAKIIPNHKL EIVEGADHCY TKHQSQLITN VMEFIKTVIV KNN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)