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AT1G24350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.764
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Acid phosphatase/vanadium-dependent haloperoxidase-related protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acid phosphatase/vanadium-dependent haloperoxidase-related protein; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1124 Blast hits to 1124 proteins in 413 species: Archae - 0; Bacteria - 739; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).
Protein Annotations
EMBL:AK317072EMBL:CP002684EnsemblPlants:AT1G24350EnsemblPlants:AT1G24350.1
entrez:839051ExpressionAtlas:B9DG97GeneID:839051GO:GO:0004601
GO:GO:0016021Gramene:AT1G24350.1hmmpanther:PTHR31446hmmpanther:PTHR31446:SF5
HOGENOM:HOG000067103InterPro:IPR003832Pfam:PF02681PhylomeDB:B9DG97
Proteomes:UP000006548RefSeq:NP_564215.1TAIR:AT1G24350TMHMM:TMhelix
UniGene:At.10536UniGene:At.71223UniProt:B9DG97
Coordinates (TAIR10) chr1:-:8639098..8640313
Molecular Weight (calculated) 18053.60 Da
IEP (calculated) 7.18
GRAVY (calculated) 0.26
Length 168 amino acids
Sequence (TAIR10)
(BLAST)
001: MEDSTATATS SSSTHYFSIF TNYPLISAVT SFTIAQFIKL FTSWYRERRW DLKQLIGSGG MPSSHSATVT ALAVAIGLQE GFGGSHFAIA LILASVVMYD
101: ATGVRLHAGR QAEVLNQIVY ELPAEHPLAE SRPLRELLGH TPPQVVAGGM LGSATAVTGY LFFRIATS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)