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AT1G16400.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.981
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 79, subfamily F, polypeptide 2
Curator
Summary (TAIR10)
Encodes cytochrome P450 CYP79F2.
Computational
Description (TAIR10)
cytochrome P450, family 79, subfamily F, polypeptide 2 (CYP79F2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome p450 79f1 (TAIR:AT1G16410.1); Has 27578 Blast hits to 27450 proteins in 1508 species: Archae - 44; Bacteria - 2254; Metazoa - 10521; Fungi - 5390; Plants - 8520; Viruses - 3; Other Eukaryotes - 846 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G16400-MONOMERBioCyc:MetaCyc:AT1G16400-MONOMEREC:1.14.13.n6eggNOG:COG2124
eggNOG:KOG0156EMBL:AC006341EMBL:AF275259EMBL:AF370512
EMBL:AY064649EMBL:CP002684EnsemblPlants:AT1G16400EnsemblPlants:AT1G16400.1
entrez:838210Gene3D:1.10.630.10GeneID:838210Genevisible:Q9FUY7
GO:GO:0005506GO:GO:0005783GO:GO:0005789GO:GO:0009684
GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0019761
GO:GO:0020037GO:GO:0098542Gramene:AT1G16400.1gramene_plant_reactome:1119486
gramene_plant_reactome:6875991hmmpanther:PTHR24298hmmpanther:PTHR24298:SF1HOGENOM:HOG000218628
InParanoid:Q9FUY7InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT1G16400KO:K12155OMA:FAGTHTIPaxDb:Q9FUY7
Pfam:PF00067Pfam:Q9FUY7PhylomeDB:Q9FUY7PIR:C86299
PRIDE:Q9FUY7PRINTS:PR00463PRO:PR:Q9FUY7PROSITE:PS00086
ProteinModelPortal:Q9FUY7Proteomes:UP000006548RefSeq:NP_563995.2scanprosite:PS00086
SMR:Q9FUY7STRING:3702.AT1G16400.1SUPFAM:SSF48264TAIR:AT1G16400
tair10-symbols:CYP79F2TMHMM:TMhelixUniGene:At.11315UniProt:Q9FUY7
Coordinates (TAIR10) chr1:+:5605231..5607281
Molecular Weight (calculated) 61435.60 Da
IEP (calculated) 8.26
GRAVY (calculated) -0.30
Length 537 amino acids
Sequence (TAIR10)
(BLAST)
001: MMMKISFNTC FQILLGFIVF IASITLLGRI FSRPSKTKDR CRQLPPGRPG WPILGNLPEL IMTRPRSKYF HLAMKELKTD IACFNFAGTH TITINSDEIA
101: REAFRERDAD LADRPQLSIV ESIGDNYKTM GTSSYGEHFM KMKKVITTEI MSVKTLNMLE AARTIEADNL IAYIHSMYQR SETVDVRELS RVYGYAVTMR
201: MLFGRRHVTK ENMFSDDGRL GKAEKHHLEV IFNTLNCLPG FSPVDYVDRW LGGWNIDGEE ERAKVNVNLV RSYNNPIIDE RVEIWREKGG KAAVEDWLDT
301: FITLKDQNGN YLVTPDEIKA QCVEFCIAAI DNPANNMEWT LGEMLKNPEI LRKALKELDE VVGKDRLVQE SDIRNLNYLK ACCRETFRIH PSAHYVPPHV
401: ARQDTTLGGY FIPKGSHIHV CRPGLGRNPK IWKDPLAYEP ERHLQGDGIT KEVTLVETEM RFVSFSTGRR GCVGVKVGTI MMAMMLARFL QGFNWKLHRD
501: FGPLSLEEDD ASLLMAKPLL LSVEPRLASN LYPKFRP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)