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AT1G10360.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.628
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutathione S-transferase TAU 18
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase TAU 18 (GSTU18); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT1G10370.1); Has 5056 Blast hits to 5041 proteins in 1030 species: Archae - 0; Bacteria - 2429; Metazoa - 208; Fungi - 116; Plants - 1907; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G10360-MONOMERBioGrid:22815EC:2.5.1.18eggNOG:ENOG410XSIX
eggNOG:KOG0406EMBL:AC005489EMBL:AF288190EMBL:AK317183
EMBL:BT000940EMBL:CP002684EnsemblPlants:AT1G10360EnsemblPlants:AT1G10360.1
entrez:837575Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:837575
Genevisible:Q9FUS9GO:GO:0004364GO:GO:0005737GO:GO:0005829
GO:GO:0006749GO:GO:0009407GO:GO:0009636Gramene:AT1G10360.1
hmmpanther:PTHR11260hmmpanther:PTHR11260:SF312HOGENOM:HOG000125749InParanoid:Q9FUS9
IntAct:Q9FUS9InterPro:IPR004045InterPro:IPR004046InterPro:IPR010987
InterPro:IPR012336KEGG:ath:AT1G10360KO:K00799ncoils:Coil
OMA:FNGDHIGPaxDb:Q9FUS9Pfam:PF00043Pfam:PF13417
Pfam:Q9FUS9Pfscan:PS50404Pfscan:PS50405PhylomeDB:Q9FUS9
PRIDE:Q9FUS9PRO:PR:Q9FUS9PROSITE:PS50404PROSITE:PS50405
ProteinModelPortal:Q9FUS9Proteomes:UP000006548RefSeq:NP_172507.1SMR:Q9FUS9
STRING:3702.AT1G10360.1SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT1G10360
tair10-symbols:ATGSTU18tair10-symbols:GST29tair10-symbols:GSTU18UniGene:At.11288
UniProt:Q9FUS9
Coordinates (TAIR10) chr1:-:3395738..3396806
Molecular Weight (calculated) 25912.10 Da
IEP (calculated) 7.20
GRAVY (calculated) -0.23
Length 227 amino acids
Sequence (TAIR10)
(BLAST)
001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)