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AT1G10060.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : branched-chain amino acid transaminase 1
Curator
Summary (TAIR10)
encodes a mitochondrial branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.
Computational
Description (TAIR10)
branched-chain amino acid transaminase 1 (BCAT-1); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, protein binding, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid transaminase 2 (TAIR:AT1G10070.2); Has 6519 Blast hits to 6519 proteins in 2279 species: Archae - 103; Bacteria - 4487; Metazoa - 263; Fungi - 384; Plants - 208; Viruses - 0; Other Eukaryotes - 1074 (source: NCBI BLink).
Protein Annotations
EC:2.6.1.42eggNOG:COG0115eggNOG:KOG0975EMBL:CP002684
EnsemblPlants:AT1G10060EnsemblPlants:AT1G10060.1entrez:837542ExpressionAtlas:F4I2Q0
GeneID:837542GO:GO:0009081GO:GO:0052654GO:GO:0052655
GO:GO:0052656Gramene:AT1G10060.1gramene_pathway:2.6.1.42gramene_pathway:ILEUDEG-PWY
gramene_pathway:ILEUSYN-PWYgramene_pathway:LEU-DEG2-PWYgramene_pathway:LEUSYN-PWYgramene_pathway:PWY-3921
gramene_pathway:VALDEG-PWYgramene_pathway:VALSYN-PWYhmmpanther:PTHR11825hmmpanther:PTHR11825:SF54
InterPro:IPR001544InterPro:IPR005786InterPro:IPR018300KEGG:00270+2.6.1.42
KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42
PANTHER:PTHR11825PaxDb:F4I2Q0Pfam:PF01063PIRSF:PIRSF006468
PRIDE:F4I2Q0PROSITE:PS00770ProteinModelPortal:F4I2Q0Proteomes:UP000006548
RefSeq:NP_563859.1scanprosite:PS00770SMR:F4I2Q0STRING:3702.AT1G10060.2
SUPFAM:SSF56752TAIR:AT1G10060tair10-symbols:ATBCAT-1tair10-symbols:BCAT-1
UniGene:At.5432UniProt:F4I2Q0
Coordinates (TAIR10) chr1:+:3284445..3286577
Molecular Weight (calculated) 33787.50 Da
IEP (calculated) 9.00
GRAVY (calculated) -0.20
Length 309 amino acids
Sequence (TAIR10)
(BLAST)
001: MALRRCLPQY STTSSYLSKI WGFRMHGTKA AASVVEEHVS GAEREDEEYA DVDWDNLGFS LVRTDFMFAT KSCRDGNFEQ GYLSRYGNIE LNPAAGILNY
101: GQGLIEGMKA YRGEDGRVLL FRPELNAMRM KIGAERMCMH SPSVHQFIEG VKQTVLANRR WVPPPGKGSL YLRPLLFGSG ASLGVAAASE YTFLVFGSPV
201: QNYFKEGTAA LNLYVEEVIP RAYLGGTGGV KAISNYGPVL EVMRRAKSRG FSDVLYLDAD TGKNIEEVSA ANIFLVKGNT IVTPATSGTI LGGITRGRTK
301: CSGRRTEGS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)