AT1G10060.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : branched-chain amino acid transaminase 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
encodes a mitochondrial branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
branched-chain amino acid transaminase 1 (BCAT-1); FUNCTIONS IN: branched-chain-amino-acid transaminase activity, protein binding, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain amino acid transaminase 2 (TAIR:AT1G10070.2); Has 6519 Blast hits to 6519 proteins in 2279 species: Archae - 103; Bacteria - 4487; Metazoa - 263; Fungi - 384; Plants - 208; Viruses - 0; Other Eukaryotes - 1074 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr1:+:3284445..3286577 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 33787.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.00 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 309 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MALRRCLPQY STTSSYLSKI WGFRMHGTKA AASVVEEHVS GAEREDEEYA DVDWDNLGFS LVRTDFMFAT KSCRDGNFEQ GYLSRYGNIE LNPAAGILNY 101: GQGLIEGMKA YRGEDGRVLL FRPELNAMRM KIGAERMCMH SPSVHQFIEG VKQTVLANRR WVPPPGKGSL YLRPLLFGSG ASLGVAAASE YTFLVFGSPV 201: QNYFKEGTAA LNLYVEEVIP RAYLGGTGGV KAISNYGPVL EVMRRAKSRG FSDVLYLDAD TGKNIEEVSA ANIFLVKGNT IVTPATSGTI LGGITRGRTK 301: CSGRRTEGS |
||||||||||||||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)