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AT1G09795.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30135097 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23851315 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23549413 (2013): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP phosphoribosyl transferase 2
Curator
Summary (TAIR10)
ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis
Computational
Description (TAIR10)
ATP phosphoribosyl transferase 2 (ATP-PRT2); FUNCTIONS IN: ATP phosphoribosyltransferase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine biosynthesis HisG: ATP phosphoribosyltransferase (InterPro:IPR001348), ATP phosphoribosyltransferase, conserved site (InterPro:IPR018198), ATP phosphoribosyltransferase, catalytic domain (InterPro:IPR013820), Histidine biosynthesis HisG, C-terminal (InterPro:IPR013115), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); BEST Arabidopsis thaliana protein match is: ATP phosphoribosyl transferase 1 (TAIR:AT1G58080.1); Has 6354 Blast hits to 6354 proteins in 2167 species: Archae - 206; Bacteria - 4075; Metazoa - 2; Fungi - 141; Plants - 71; Viruses - 0; Other Eukaryotes - 1859 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT1G09795-MONOMEREC:2.4.2.17eggNOG:COG0040eggNOG:KOG2831
EMBL:AB025250EMBL:AC000132EMBL:AK118503EMBL:AY088378
EMBL:BT002054EMBL:BT008501EMBL:CP002684EnsemblPlants:AT1G09795
EnsemblPlants:AT1G09795.1entrez:837509Gene3D:3.30.70.120GeneID:837509
Genevisible:Q8GSJ1GO:GO:0000105GO:GO:0000287GO:GO:0003879
GO:GO:0009507GO:GO:0009570Gramene:AT1G09795.1gramene_pathway:2.4.2.17
gramene_pathway:HISTSYN-PWYgramene_plant_reactome:1119509gramene_plant_reactome:6874326HAMAP:MF_00079
hmmpanther:PTHR21403hmmpanther:PTHR21403:SF0HOGENOM:HOG000223249InParanoid:Q8GSJ1
InterPro:IPR001348InterPro:IPR011322InterPro:IPR013115InterPro:IPR013820
InterPro:IPR015867InterPro:IPR018198InterPro:IPR020621iPTMnet:Q8GSJ1
KEGG:00340+2.4.2.17KEGG:ath:AT1G09795KO:K00765OMA:GMLTLHC
PANTHER:PTHR21403PaxDb:Q8GSJ1Pfam:PF01634Pfam:PF08029
Pfam:Q8GSJ1PhylomeDB:Q8GSJ1PRIDE:Q8GSJ1PRO:PR:Q8GSJ1
PROSITE:PS01316ProteinModelPortal:Q8GSJ1Proteomes:UP000006548RefSeq:NP_563853.1
scanprosite:PS01316SMR:Q8GSJ1STRING:3702.AT1G09795.1SUPFAM:SSF53850
SUPFAM:SSF54913SwissPalm:Q8GSJ1TAIR:AT1G09795tair10-symbols:ATATP-PRT2
tair10-symbols:ATP-PRT2tair10-symbols:HISN1BTIGRfam:TIGR00070TIGRfam:TIGR03455
TIGRFAMs:TIGR00070TIGRFAMs:TIGR03455UniGene:At.477UniGene:At.49869
UniPathway:UPA00031UniProt:Q8GSJ1
Coordinates (TAIR10) chr1:+:3173588..3176690
Molecular Weight (calculated) 44759.00 Da
IEP (calculated) 6.78
GRAVY (calculated) -0.03
Length 413 amino acids
Sequence (TAIR10)
(BLAST)
001: MPISIPLNAT LQYSSPSSSS SSSSLVPSSP LFSPIPSTTV SLTGIRQRCL RMVTSCVSNA QKSVLNGATD SVSVVGREQI RLGLPSKGRM AADSLDLLKD
101: CQLFVKQVNP RQYVAQIPQL PNTEVWFQRP KDIVRKLLSG DLDLGIVGLD IVGEFGQGNE DLIIVHEALN FGDCHLSLAI PNYGIFENIK SLKELAQMPQ
201: WTEERPLRVA TGFTYLGPKF MKDNGIKHVT FSTADGALEA APAMGIADAI LDLVSSGTTL KENNLKEIEG GVVLESQAAL VASRRALTER KGALETVHEI
301: LERLEAHLKA NGQFTVVANM RGTDAEEVAE RVKTQPSLSG LQGPTISPVY CKRDGKVTIE YYAIVICVPK KALYESVQQL RAVGGSGVLV SPVTYIFHEE
401: TPRWSQLLSN LGL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)