suba logo
AT1G04710.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : peroxisomal 3-ketoacyl-CoA thiolase 4
Curator
Summary (TAIR10)
EC2.3.1.16 thiolase.
Computational
Description (TAIR10)
peroxisomal 3-ketoacyl-CoA thiolase 4 (PKT4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acetyl-CoA C-acyltransferase activity; INVOLVED IN: catechol catabolic process, ortho-cleavage, protocatechuate catabolic process, ortho-cleavage, metabolic process, fatty acid oxidation; LOCATED IN: peroxisome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 3 (TAIR:AT2G33150.1); Has 22406 Blast hits to 22392 proteins in 2262 species: Archae - 405; Bacteria - 14105; Metazoa - 1004; Fungi - 662; Plants - 281; Viruses - 0; Other Eukaryotes - 5949 (source: NCBI BLink).
Protein Annotations
EC:2.3.1.16eggNOG:COG0183eggNOG:KOG1389EMBL:AC002376
EMBL:AY085052EMBL:AY099741EMBL:BT003415EMBL:CP002684
EnsemblPlants:AT1G04710EnsemblPlants:AT1G04710.1entrez:839434Gene3D:3.40.47.10
GeneID:839434Genevisible:Q8LF48GO:GO:0003988GO:GO:0005773
GO:GO:0005777GO:GO:0031408Gramene:AT1G04710.1gramene_pathway:2.3.1.16
gramene_pathway:PWY-5136gramene_pathway:PWY-735hmmpanther:PTHR18919hmmpanther:PTHR18919:SF93
HOGENOM:HOG000012239InterPro:IPR002155InterPro:IPR016039InterPro:IPR020610
InterPro:IPR020613InterPro:IPR020615InterPro:IPR020616InterPro:IPR020617
iPTMnet:Q8LF48KEGG:ath:AT1G04710KO:K07513OMA:IQACLQV
PaxDb:Q8LF48Pfam:PF00108Pfam:PF02803Pfam:Q8LF48
PhylomeDB:Q8LF48PIR:A86180PIRSF:PIRSF000429PRIDE:Q8LF48
PRO:PR:Q8LF48PROSITE:PS00098PROSITE:PS00099PROSITE:PS00737
ProteinModelPortal:Q8LF48Proteomes:UP000006548Reactome:R-ATH-2046106Reactome:R-ATH-390247
RefSeq:NP_171965.1scanprosite:PS00098scanprosite:PS00099scanprosite:PS00737
SMR:Q8LF48STRING:3702.AT1G04710.1SUPFAM:SSF53901TAIR:AT1G04710
tair10-symbols:KAT1tair10-symbols:PKT4TIGRfam:TIGR01930TIGRFAMs:TIGR01930
UniGene:At.42435UniPathway:UPA00199UniProt:Q8LF48
Coordinates (TAIR10) chr1:+:1321941..1324556
Molecular Weight (calculated) 46613.90 Da
IEP (calculated) 8.41
GRAVY (calculated) -0.06
Length 443 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKATERQRI LLRHLQPSSS SDASLSASAC LSKDSAAYQY GDDVVIVAAQ RTALCKAKRG SFKDTFPDEL LASVLRALIE KTNVNPSEVG DIVVGTVLGP
101: GSQRASECRM AAFYAGFPET VPIRTVNRQC SSGLQAVADV AAAIKAGFYD IGIGAGLESM TTNPRGWKGS VNPNVKKFEQ AHNCLLPMGI TSENVAHRFN
201: VSREEQDQAA VDSHRKAASA TASGKFKDEI TPVKTKIVDP KTGDEKPITV SVDDGIRPNT TLSGLAKLKP VFKEDGTTTA GNSSQLSDGA GAVLLMRRNV
301: AMQKGLPILG VFRTFSAVGV DPAIMGVGPA VAIPAAVKAA GLELNDVDLF EINEAFASQF VYCRNKLGLD AEKINVNGGA IAIGHPLGAT GARCVATLLH
401: EMKRRGKDCR FGVVSMCIGS GMGAAAVFER GGGVDELCDV RKV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)