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AT5G50000.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G01490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G50000-MONOMEReggNOG:COG0515eggNOG:KOG0192EMBL:AB026650EMBL:CP002688EnsemblPlants:AT5G50000EnsemblPlants:AT5G50000.1
entrez:835064GeneID:835064GO:GO:0004712GO:GO:0005524GO:GO:0005886GO:GO:0009506Gramene:AT5G50000.1
hmmpanther:PTHR23257hmmpanther:PTHR23257:SF512InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009KEGG:ath:AT5G50000
ncoils:CoilOMA:GMIPNDQPfam:PF07714Pfscan:PS50011PhylomeDB:Q9FGB1PRINTS:PR00109PROSITE:PS00108
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_199811.1scanprosite:PS00108SMART:SM00220SMR:Q9FGB1STRING:3702.AT5G50000.1
SUPFAM:SSF56112SwissPalm:Q9FGB1TAIR:AT5G50000UniGene:At.29758UniProt:Q9FGB1
Coordinates (TAIR10) chr5:-:20342838..20345033
Molecular Weight (calculated) 42731.50 Da
IEP (calculated) 7.86
GRAVY (calculated) -0.35
Length 385 amino acids
Sequence (TAIR10)
(BLAST)
001: MKEGKDGFVR ADQIDLKSLD EQLERHLSRA LTLEKNKKKD EEDTTAVAIG GSASSSPVTL NGGGFVGKRK QRLEWEIDPS KLIIKTVLAR GTFGTVHRGI
101: YDGQDVAVKL LDWGEEGHRS EAEIVSLRAD FAQEVAVWHK LDHPNVTKFI GATMGASGLQ LQTESGPLAM PNNICCVVVE YLPGGALKSY LIKNRRRKLT
201: FKIVVQLALD LARGLSYLHS QKIVHRDVKT ENMLLDKTRT VKIADFGVAR VEASNPNDMT GETGTLGYMA PEVLNGNPYN RKCDVYSFGI CLWEIYCCDM
301: PYPDLTFSEV TSAVVRQNLR PDIPRCCPSA LAAVMKRCWD ANPDKRPEMD EVVPMLESID TTKGGGMIPN DQQQGCLCFR RKRGP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)