AT5G23540.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Mov34/MPN/PAD-1 family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Mov34/MPN/PAD-1 family protein; INVOLVED IN: response to salt stress, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9-signalosome 5B (TAIR:AT1G71230.1); Has 1553 Blast hits to 1553 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 704; Fungi - 411; Plants - 244; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:7938109..7939339 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 29209.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.51 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||
| Length | 259 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEVMGLMLGE FVDEYTVRVV DVFAMPQSGT GVSVEAVDHV FQTNMLDMLK QTGRPEMVVG WYHSHPGFGC WLSGVDINTQ QSFEALNQRA VAVVVDPIQS 101: VKGKVVIDAF RSINPQTIML GQEPRQTTSN LGHLNKPSIQ ALIHGLNRHY YSIAINYRKN ELEEKMLLNL HKKKWTDGLT LRRFDTHSKT NEQTVQEMLS 201: LAAKYNKAVQ EEDELSPEKL AIVNVGRQDA KKHLEEHVSN LMSSNIVQTL GTMLDTVVF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)