AT5G10020.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.930 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich receptor-like protein kinase family protein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G27060.1); Has 139678 Blast hits to 85602 proteins in 3004 species: Archae - 100; Bacteria - 15783; Metazoa - 35548; Fungi - 4368; Plants - 70555; Viruses - 172; Other Eukaryotes - 13152 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:3133514..3136949 | ||||||||||||
| Molecular Weight (calculated) | 109393.00 Da | ||||||||||||
| IEP (calculated) | 6.82 | ||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||
| Length | 1000 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSHFLTFCFL SLLLLLHGAN AVTETELRSL LEFRKGIRDE TSHQRISWSD TSSLTDPSTC PNDWPGISCD PETGSIIAIN LDRRGLSGEL KFSTLSGLTR 101: LRNLSLSGNS FSGRVVPSLG GISSLQHLDL SDNGFYGPIP GRISELWSLN HLNLSSNKFE GGFPSGFRNL QQLRSLDLHK NEIWGDVGEI FTELKNVEFV 201: DLSCNRFNGG LSLPMENISS ISNTLRHLNL SHNALNGKFF SEESIGSFKN LEIVDLENNQ INGSISEINS STLTMLNLSS NGLSGDLPSS FKSCSVIDLS 301: GNTFSGDVSV VQKWEATPDV LDLSSNNLSG SLPNFTSAFS RLSVLSIRNN SVSGSLPSLW GDSQFSVIDL SSNKFSGFIP VSFFTFASLR SLNLSRNNLE 401: GPIPFRGSRA SELLVLNSYP QMELLDLSTN SLTGMLPGDI GTMEKIKVLN LANNKLSGEL PSDLNKLSGL LFLDLSNNTF KGQIPNKLPS QMVGFNVSYN 501: DLSGIIPEDL RSYPPSSFYP GNSKLSLPGR IPADSSGDLS LPGKKHHSKL SIRIAIIVAS VGAAIMILFV LFAYHRTQLK DFHGRNRFTD QATTRDTKFG 601: RSSRPSLFNF SSNVEQQSSS LSFSNDHLLT ANSRSLSGIP GCEAEISEQG APATSAPTNL LDDYPAASGR KSSSGGSPLS SSPRFSDQPV MLDVYSPDRL 701: AGELFFLDVS LKLTAEELSR APAEVLGRSS HGTLYKATLD NGHMLTVKWL RVGLVRHKKD FAREAKKIGS LKHPNIVPLR AYYWGPREQE RLLLSDYLRG 801: ESLAMHLYET TPRRYSPMSF SQRLKVAVEV AQCLLYLHDR AMPHGNLKPT NIILSSPDNT VRITDYCVHR LMTPSGVAEQ ILNMSALGYS APELSSASKP 901: IPTLKSDVYA FGVILMELLT RRSAGDIISG QTGAVDLTDW VRLCDQEGRR MDCIDRDIAG GEEFSKGMED ALAVAIRCIL SVNERPNIRQ VLDHLTSISA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)