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AT5G09570.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.979
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cox19-like CHCH family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cox19-like CHCH family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64400.1); Has 185 Blast hits to 185 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 43; Plants - 59; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ITQNeggNOG:ENOG410Y33ZEMBL:AK118694EMBL:AL353994EMBL:BT003661EMBL:CP002688EnsemblPlants:AT5G09570
EnsemblPlants:AT5G09570.1entrez:830816GeneID:830816Gramene:AT5G09570.1hmmpanther:PTHR13523HOGENOM:HOG000194088InterPro:IPR010625
KEGG:ath:AT5G09570OMA:LANSDACPfam:PF06747PhylomeDB:Q9LXC2PIR:T49941Proteomes:UP000006548RefSeq:NP_196519.1
SMR:Q9LXC2STRING:3702.AT5G09570.1TAIR:AT5G09570UniGene:At.32487UniProt:Q9LXC2
Coordinates (TAIR10) chr5:+:2970733..2971970
Molecular Weight (calculated) 14460.00 Da
IEP (calculated) 9.43
GRAVY (calculated) -0.33
Length 139 amino acids
Sequence (TAIR10)
(BLAST)
001: MPRGSSGGRS SYRPSRPAAA RSPPPQSVNR APPPATAQPS SGGSFLGNIG ASITEGLAWG TGTAFGHRVV DSVMGPRTFK HETVVSQVPS AANTMTACDI
101: HSKAFQDCVN HFGSDISKCQ FYMDMLSECK KNSGSVVAA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)