AT4G24800.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.992 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : MA3 domain-containing protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
MA3 domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12782463..12784902 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77439.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.76 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 702 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGFLTDQQR EMMKVATQTA DDLPPSQKPH SVLLEHLPKP SGGGKASGAS NAVKHRRSHA GRSIRSKKDG GGGKGNWGKL IDTDGDYHID PNDPNYDSGE 101: EPFELVGATL SDPLDDYKKA AASIINEYFS TGDVDVAAAD LIELGSSEYH PYFIKRLVSV AMDRHDKEKE MASVLLSALY ADVINPNQIR DGFVLLLESA 201: DDFVVDIPDA VNVLALFLAR AVVDDILPPA FLPRAAKALP ITSKGYQVVQ TAEKSYLSAA HHAELVERRW GGQTRTTVEE VKKKIADILN EYVETGETYE 301: ACRCVRELGV SFFHHEVVKR ALVTALENHA AEAPVLKLLN EAASENLISS SQMVKGFSRL RESLDDLALD IPSARTKFGL IVPKAVSGGW LDASFGYPSG 401: ECGRQQNEDE KLKRFKEDIV TIIHEYFNSD DIPELIRSLE DLGAPEYNPI FLKKLITLAL DRKNHEKEMA SVLLSSLHIE MFTTEDVADG FVMLLESAED 501: TALDILDASN ELALFLARAV IDDVLAPFNL EEISSKLRPN SSGTETVKMA RSLIFARHAG ERLLRCWGGG SGWAVEDAKD KISNLLEEYE SSGLVSEACK 601: CIHELGMPFF NHEVVKKALV MGMEKKKDKM MLDLLQESFS EGLITTNQMT KGFTRVKDGL EDLALDIPNA KEKFNDYVEY GKKNGWVSSS FLTSLTEDAN 701: VG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)