AT4G22130.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.548 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : STRUBBELIG-receptor family 8 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
STRUBBELIG-receptor family 8 (SRF8); FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 6 (TAIR:AT1G53730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:11724781..11727331 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61186.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.30 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||
| Length | 562 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSLSYMNVS GNSLTMSIGD IFADHKSLAT LDLSHNNFSG DLPSSLSTVS TLSVLYVQNN QLTGSIDVLS GLPLKTLNVA NNHFNGSIPK ELSSIQTLIY 101: DGNSFDNVPA SPQPERPGKK ETPSGSKKPK IGSEEKSSDS GKGLSGGVVT GIVFGSLFVA GIIALVLYLC LHKKKRKVRG STRASQRSLP LSGTPEVQEQ 201: RVKSVASVAD LKSSPAEKVT VDRVMKNGSI SRIRSPITAS QYTVSSLQVA TNSFSQENII GEGSLGRVYR AEFPNGKIMA IKKIDNAALS LQEEDNFLEA 301: VSNMSRLRHP NIVPLAGYCT EHGQRLLVYE YVGNGNLDDT LHTNDDRSMN LTWNARVKVA LGTAKALEYL HEVCLPSIVH RNFKSANILL DEELNPHLSD 401: SGLAALTPNT ERQVSTQVVG SFGYSAPEFA LSGIYTVKSD VYTFGVVMLE LLTGRKPLDS SRTRAEQSLV RWATPQLHDI DALSKMVDPS LNGMYPAKSL 501: SRFADIIALC IQPEPEFRPP MSEVVQQLVR LVQRASVVKR RSSDDTGFSY RTPEHEHVDI SF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)