AT2G44970.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 178 Blast hits to 178 proteins in 61 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 4; Plants - 92; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:18548999..18552019 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54629.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.25 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||
| Length | 502 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFRFDPTFLK LQKLIKMGEA GQSRDGESVT PLVGGGNGDN AVAPQVFNSL PALNEAASYI TQATSYLGSC FSDYSEYGGK DTISHPHELL RSTSGVDGNS 101: PVSVCISPGE RFSTSSEAST SDANSPSRES TEILPQATNA IVTSNRLNLN GISMFQGLIE RARRTVRGSA DDIGWLQRAP EMPPVEDGTD RFNKILEDIG 201: HGVHRLPNTV VYLLVPGLFS NHGPLYFVDT KTKFSKMGLA CHIAKIHSES SVEKNAREIK EYIEELCWGS NKRVLLLGHS KGGIDAAAAL SLYWPELKDK 301: VAGLVLAQSP YGGSPIATDI LREGQLGDYV NLRKMMEILI SKVIKGDIQA LEDLTYERRK EFLKNHPLPR ELPTVSFRTE ASISPAVLST LSHVAHAELP 401: LTNQAAKLPV VMPLGAAMAA CAQLLQVRYG EKSDGLVTCC DAEVPGSVVV RPKRKLDHAW MVYSSLNEVP LEADAAQVCE ALLTLLVQVE QERQQKLATK 501: ID |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)