AT2G37840.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.699 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53930.2); Has 51534 Blast hits to 51036 proteins in 1321 species: Archae - 36; Bacteria - 3205; Metazoa - 22459; Fungi - 6825; Plants - 7556; Viruses - 105; Other Eukaryotes - 11348 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:15853108..15856047 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66450.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.46 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 596 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNELEKVSNG LKLLLNVYCR ISRSLQPRGL AETLCGSPLY MAPEIMQLQK YDAKADLWSV GAILFQLVTG RTPFTGNSQI QLLQNIIRST ELHFPGDCRD 101: LSLDCIDLCQ KLLRRNPVER LTFEEFFNHP FLSDRQSYDF SRSRLGLRTM DGFLSSGSSP SRNMEESSQE DCLPFLLDDD SSGPEGSPSY LKKTSSMKSS 201: SGIKVDTRIE RKEVESSPLK HTELTSGYSS FNQKVENDRF RFETQINSDR RNRREPTGLT DSRSLIAPGR VDDSQDSMDQ DFVLVSGPPV DMPSSSSSSS 301: KPYNFPFKSQ SPPVELFNRS ISSTAPMPII GATSNSIGQF GSLDSQYSAP STSHGSLDLG DAFEQPSTHS LTRIRSLRKY AATIAELVYE RIESDKHLEA 401: FSIQLAILAI WKQALHICHT QAISGLEGSP SQDINKLRSS SLKHDTHSSN KVTDLSHDGS EEISSQIQRQ FIQEIELAEE LAKSIEPGNT KMPDAMETIF 501: EAALDLGKLG GVKEVMGDTE NAGNQYSKAV RLLVFLLVEA PMLILNPPLS LTNSVRYRLR TYIDFLSRRL KHLQSHRRSS AGQMQGSSLA MMNRQS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)