AT2G32080.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.863 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : purin-rich alpha 1 | ||||||||
| Curator Summary (TAIR10) |
similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication | ||||||||
| Computational Description (TAIR10) |
purin-rich alpha 1 (PUR ALPHA-1); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PUR-alpha/beta/gamma, DNA/RNA-binding (InterPro:IPR006628); Has 588 Blast hits to 332 proteins in 74 species: Archae - 0; Bacteria - 31; Metazoa - 438; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:13642716..13644036 | ||||||||
| Molecular Weight (calculated) | 32103.50 Da | ||||||||
| IEP (calculated) | 6.05 | ||||||||
| GRAVY (calculated) | -0.46 | ||||||||
| Length | 295 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MEANSGGGGG AEGGRAVTGG GGGGGGSDVE LVSKTLQVEH KLFYFDLKEN PRGRYLKISE KTSATRSTII VPSSGISWFL DLFNYYVNSE EHELFSKELQ 101: LDSKVFYFDI GENRRGRFLK VSEASVSRNR STIIVPAGSS PDEGWAAFRN ILAEIHEASG LFVMPNQKPS DGQEHLVDDV GAGFIPGHGS QQPSSSEHNV 201: DRTIDSPGQE ETGMTGVSKV IRADQKRFFF DLGNNNRGHF LRISEVAGSD RSSIILPLSG LKQFHEVIGH FVEITKDKIE GMTGANVRTV DPPQR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)