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AT5G60730.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:27943495 (2017): mitochondrion
  • PMID:22574745 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Anion-transporting ATPase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Anion-transporting ATPase; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 2815 Blast hits to 2379 proteins in 780 species: Archae - 173; Bacteria - 1911; Metazoa - 144; Fungi - 222; Plants - 104; Viruses - 0; Other Eukaryotes - 261 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G60730-MONOMEReggNOG:COG0003eggNOG:KOG2825EMBL:BT015736
EMBL:BT020179EMBL:CP002688EnsemblPlants:AT5G60730EnsemblPlants:AT5G60730.1
entrez:836194Gene3D:3.40.50.300GeneID:836194GO:GO:0005524
GO:GO:0005739GO:GO:0016887Gramene:AT5G60730.1hmmpanther:PTHR10803
HOGENOM:HOG000197637InterPro:IPR016300InterPro:IPR025723InterPro:IPR027417
KEGG:ath:AT5G60730ncoils:CoilOMA:KTLIMSTPANTHER:PTHR10803
Pfam:PF02374PhylomeDB:Q5XF80Proteomes:UP000006548RefSeq:NP_200881.2
SMR:Q5XF80STRING:3702.AT5G60730.1SUPFAM:SSF52540SwissPalm:Q5XF80
TAIR:AT5G60730TIGRfam:TIGR00345TIGRFAMs:TIGR00345UniGene:At.43579
UniProt:Q5XF80
Coordinates (TAIR10) chr5:+:24422838..24425352
Molecular Weight (calculated) 42942.20 Da
IEP (calculated) 9.35
GRAVY (calculated) -0.09
Length 391 amino acids
Sequence (TAIR10)
(BLAST)
001: MAALLLLNRV SRSTSSISLH RVAGTLGFNS FNAQIHGDRI SGTLFRVRSL ATLAEGASHF NEMVSVNQRK YYLLGGKGGV GKTSCAASLA VKFASHGHPT
101: IVVSTDPAHS LSDSFSQDLS GGVLKPVQGV DSPLLALEIT PEIMKDEIKR QTGDKSVKNM MDSMGLGMFA GELGDLNLED MLNAASPGID EIAAISKVLQ
201: FMEAPEYSRF TRIVFDTAPT GHTLRLLSLP DFYDSSISKI TKLKKKITAA ASAFKLVFGK KEIQQKELPN ELDQLKERME KVRNVFRDVD TTEFVIVTIP
301: TVMAINESSR LHASLRKENV PVHRLIVNQL LPQSESDCKF CSIRRKEQTR VLGLIQNDTE LSGLKLIQSP LLDAEIRGVP ALKFMGDLIW K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)