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AT5G26720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 15 Blast hits to 15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AK118263EMBL:BT004927EMBL:CP002688EnsemblPlants:AT5G26720
EnsemblPlants:AT5G26720.1entrez:832717GeneID:832717GO:GO:0009860
Gramene:AT5G26720.1hmmpanther:PTHR35123hmmpanther:PTHR35123:SF2HOGENOM:HOG000148323
IntAct:Q8GXF7KEGG:ath:AT5G26720OMA:LETNDFCProteomes:UP000006548
RefSeq:NP_850873.1STRING:3702.AT5G26720.1TAIR:AT5G26720UniGene:At.30847
UniProt:Q8GXF7
Coordinates (TAIR10) chr5:+:9304105..9304509
Molecular Weight (calculated) 15548.10 Da
IEP (calculated) 10.17
GRAVY (calculated) -1.49
Length 134 amino acids
Sequence (TAIR10)
(BLAST)
001: MPGNHSEISL NEQNRVDDND TKTKTTTRKK KKKKDVTIVD DDDNQFDTTN QLVKSKNRFL GKFRKKPKSP KRWSGSRKGG CFRVMRPRRR EGGDDDSSVS
101: SPVSDPNDER FSHEMLRVML ETNDFCSDEC NPHR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)