AT4G38540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FAD/NAD(P)-binding oxidoreductase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G05320.1); Has 5392 Blast hits to 5382 proteins in 1070 species: Archae - 48; Bacteria - 3093; Metazoa - 5; Fungi - 1172; Plants - 539; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:18023187..18024827 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45507.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.30 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||
| Length | 407 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEEGSPDII IVGAGISGLS TAVGLHRLGI RSMVLESSET LRATGFAFTT WFNAWKAMEA LGVSQHIRSL HDRLEGWVVG TISAGTPPTE MLFPESEEYE 101: SRCVQRKLLL EALAGELPEE TIRFSSKVVH IELSGCYKKV HLSDGTILKT KVLVGCDGVY SVVGKWLGFK NPATTARLAI RGLTHFPEGH GFGKRFFQFY 201: GDGVRSGFIP CDHNTVYWFL THTSTDIDEE TNSEILKEFV LNKIKDLPEN IKNVVETTDL DSMVMSQLKY RPPWELLWSN ITKDNVCVAG DALHPMTPDI 301: GQGGCSAMED GVILARCLGE AIKAKSLKGE TEENEEEGYK RIEEGLKKYA GERKWRSIDL ITTAYTVGFI QQSRGKWMNM FRDRFLSSYL SRMLLKKSHF 401: DCGSLVP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)