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AT4G14965.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.992
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : membrane-associated progesterone binding protein 4
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
membrane-associated progesterone binding protein 4 (MAPR4); FUNCTIONS IN: heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 2 (TAIR:AT2G24940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111JSUeggNOG:KOG1108EMBL:AK229457EMBL:AL161540
EMBL:AY084353EMBL:BT024469EMBL:CP002687EMBL:Z97337
EnsemblPlants:AT4G14965EnsemblPlants:AT4G14965.1entrez:827155Gene3D:3.10.120.10
GeneID:827155Genevisible:Q2HIW2GO:GO:0005496GO:GO:0012505
GO:GO:0016020GO:GO:0016021GO:GO:0020037Gramene:AT4G14965.1
hmmpanther:PTHR10281hmmpanther:PTHR10281:SF4HOGENOM:HOG000012760InParanoid:Q2HIW2
InterPro:IPR001199KEGG:ath:AT4G14965OMA:GWWGPRAPaxDb:Q2HIW2
Pfam:PF00173Pfam:Q2HIW2PhylomeDB:Q2HIW2PIR:C85164
PIR:H71412PRIDE:Q2HIW2PRO:PR:Q2HIW2ProteinModelPortal:Q2HIW2
Proteomes:UP000006548RefSeq:NP_567451.1SMART:SM01117SMR:Q2HIW2
STRING:3702.AT4G14965.1SUPFAM:SSF55856TAIR:AT4G14965tair10-symbols:AtMAPR4
tair10-symbols:MAPR4TMHMM:TMhelixUniGene:At.33227UniProt:Q2HIW2
Coordinates (TAIR10) chr4:+:8551356..8553368
Molecular Weight (calculated) 27168.20 Da
IEP (calculated) 8.35
GRAVY (calculated) -0.37
Length 245 amino acids
Sequence (TAIR10)
(BLAST)
001: MIPARRFLLS PFVGVTFIVV LVSLYFRSSF KSPQHQYQKR LFSAEELALY NGTDETLPIL LGILGSVFDV TKGKFHYGSG GGYNHFAGRD ASRAFVSGNF
101: TGDGLTDSLQ GLSSSEVKSI VDWRGFYSRT YTPVGKLVGR YYDSQGNPTK HLKGAEAKAS RGAQLMEKQK TEEAKQSNCN SRWSQDEGGE VWCDVGVPRL
201: VQRPLEIAIT GSMSKRCACF EEDQLDQSGL EIYKDCEPLA KTCRV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)