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AT3G28740.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.918
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cytochrome P450 superfamily protein
Curator
Summary (TAIR10)
Encodes a member of the cytochrome p450 family. Expression is upregulated in response to cis-jasmonate treatment. Overexpression induces synthesis of volatile compounds that affect chemical ecology and insect interactions.
Computational
Description (TAIR10)
CYP81D1; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone, defense response to insect; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 7 (TAIR:AT2G23190.1); Has 36095 Blast hits to 35936 proteins in 1857 species: Archae - 61; Bacteria - 5661; Metazoa - 11857; Fungi - 7468; Plants - 9503; Viruses - 3; Other Eukaryotes - 1542 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G28740-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156EMBL:AP002057EMBL:AY050849EMBL:AY113869
EMBL:CP002686EnsemblPlants:AT3G28740EnsemblPlants:AT3G28740.1entrez:822506Gene3D:1.10.630.10GeneID:822506Genevisible:Q9LHA1
GO:GO:0002213GO:GO:0005506GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0042343
GO:GO:0044550Gramene:AT3G28740.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF171HOGENOM:HOG000218627InterPro:IPR001128InterPro:IPR002401
InterPro:IPR017972KEGG:ath:AT3G28740OMA:HAVAEECPaxDb:Q9LHA1Pfam:PF00067Pfam:Q9LHA1PhylomeDB:Q9LHA1
PRIDE:Q9LHA1PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9LHA1PROSITE:PS00086ProteinModelPortal:Q9LHA1Proteomes:UP000006548
RefSeq:NP_189516.1scanprosite:PS00086SMR:Q9LHA1STRING:3702.AT3G28740.1SUPFAM:SSF48264TAIR:AT3G28740tair10-symbols:CYP81D1
TMHMM:TMhelixUniGene:At.21931UniGene:At.48716UniProt:Q9LHA1
Coordinates (TAIR10) chr3:-:10788764..10790552
Molecular Weight (calculated) 57695.80 Da
IEP (calculated) 9.23
GRAVY (calculated) -0.07
Length 509 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSTKTIMET IYLILSLFFF FIFLSLKLLF GPRPRKLNLP PSPSRPFPII GHLHLLKLPL HRRFLSLSES LNNAKIFSLS LGSRLVFVVS SHAVAEECFT
101: KNDVVLANRP EFLVGKHIGY NSTTMVGAAY GDSWRNLRRI GTIEIFSSLR LNSFVSIRQD EIRRLIICLA KNSQHGFVKV EMKPLFMCLT INNIIRMVAG
201: KRFYGDGTEN DNEAKHVRQL IAEVVVSGGA GNAADYFPIL RYVTNYEKHV KKLAGRVDEF LQSLVNEKRV EKVKGNTMID HLLSLQETQP DYYTDVIIKG
301: IILVMILAGT DTSAGTLEWA MSNLLNHPEV LRKAKTEIDD QIGVDRLVEE QDIVKLPYLQ HIVSETLRLY PVAPMLLPHL ASEDCIVDGY DVPRGTIILV
401: NAWAIHRDPK LWEEPEKFKP ERFEKKGEDK KLMPFGIGRR SCPGSGLAQR LVTLALGSLV QCFEWERVEE KYLDMRESEK GTTMRKATSL QAMCKARPIV
501: HKVLDASCP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)