AT3G14690.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.562 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 72, subfamily A, polypeptide 15 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 72, subfamily A, polypeptide 15 (CYP72A15); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 13 (TAIR:AT3G14660.1); Has 31875 Blast hits to 31741 proteins in 1631 species: Archae - 65; Bacteria - 4943; Metazoa - 11298; Fungi - 6149; Plants - 8001; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:4937410..4939310 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58445.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.26 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 512 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEISVASVTI SVVLAVVSWW IWRTLQWVWF KPKMLEHYLR RQGLAGTPYT PLVGDLKKNF TMLSEARSKP LKLTDDISPR VVPYPLQMFK TYGRTYFTWF 101: GPIPTITIMD PEQIKEVFNK VYDFQKPHTF PLATIIAKGL ANYDGDKWAK HRRIINPAFH IEKIKNMVPA FHQSCREVVG EWDQLVSDKG SSCEVDVWPG 201: LVSMTADVIS RTAFGSSYKE GQRIFELQAE LAQLIIQAFR KAFIPGYSYL PTKSNRRMKA AAREIQVILR GIVNKRLRAR EAGEAPSDDL LGILLESNLR 301: QTEGNGMSTE DLMEECKLFY FAGQETTSVL LVWTMVLLSQ HQDWQARARE EVKQVFGDKE PDAEGLNQLK VMTMILYEVL RLYPPVTQLT RAIHKELKLG 401: DLTLPGGVQI SLPILLVQHD IELWGNDAAE FNPDRFKDGL SKATKSQVSF FPFAWGPRIC IGQNFALLEA KMAMALILRR FSFEISPSYV HAPYTVITIH 501: PQFGAQLIMH KL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)