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AT3G01740.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial ribosomal protein L37
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial ribosomal protein L37; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37, mitochondrial (InterPro:IPR013870); BEST Arabidopsis thaliana protein match is: Mitochondrial ribosomal protein L37 (TAIR:AT5G14290.1); Has 178 Blast hits to 178 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 64; Fungi - 40; Plants - 51; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG411244MeggNOG:KOG3435EMBL:AC009325EMBL:AC010797EMBL:AY086215EMBL:BT003920EMBL:BT005007
EMBL:CP002686EnsemblPlants:AT3G01740EnsemblPlants:AT3G01740.1entrez:821088GeneID:821088GO:GO:0005840Gramene:AT3G01740.1
hmmpanther:PTHR28595hmmpanther:PTHR28595:SF1HOGENOM:HOG000244039InterPro:IPR013870KEGG:ath:AT3G01740KO:K17435OMA:DGSDPKI
Pfam:PF08561PhylomeDB:Q9S799Proteomes:UP000006548RefSeq:NP_566150.1STRING:3702.AT3G01740.1TAIR:AT3G01740UniGene:At.3405
UniGene:At.41237UniProt:Q9S799
Coordinates (TAIR10) chr3:+:268118..268498
Molecular Weight (calculated) 13765.50 Da
IEP (calculated) 10.81
GRAVY (calculated) -0.77
Length 126 amino acids
Sequence (TAIR10)
(BLAST)
001: MNRIGLIRGS SSKDVVRRTF AAAASKAKKG GKGGGASDAP KGSSLTKEIK STTVVGANTL KDGSDPKILP DSDYPDWLWH LLDKRPALSE LRRKNVETLP
101: YDDLKRFVKL DTRGKIKENN SIKAKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)