AT2G40430.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 709 Blast hits to 643 proteins in 201 species: Archae - 0; Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:16879466..16882365 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50164.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.46 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.87 | ||||||||||||||||||||||||||||||||||||
| Length | 442 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKRSKTSRK GKKAWRANIS SEDIEDFFEK TTRDALSGGN LSAAPSEDLF HVDKSHDLPV KRKIEKHRER VLRVDSILKK NPFVQLVPSS KPKLKKSKKT 101: IVIEDKAPKQ VQKSVGDDSV MADLWGDDSK GEHESNPRKI FKNPSIISAV EIEHPGCSYN PTTESHQDML AEAVAQEMQK VYKTELGPAP VPLTIEGDTL 201: SEDERYFLDV DNFSEGEDNE NVENEVSEAG IKLKENPFVQ LKPSSNTNLK KIEDKTPRQA QKSVGDDSVM VDLLGDDIKE DLKYFLEVGN VGEGEDNKDV 301: KIEVSEAGNN VSRKTKRVTR VELNKRCRQK ALRKKETKEK AKEKILNEID SLPNILEEIA KEDEDKQNKH LRRVIAKQEV LKIRPPRLGK YKFEAPPVQV 401: LLTEEMTGSL RKLKACCTLA RDRFKSLEKR GILVPSKQIR RF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)