AT2G32140.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : transmembrane receptors | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
transmembrane receptors; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: phloem protein 2 A5 (TAIR:AT1G65390.1); Has 1651 Blast hits to 1572 proteins in 54 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 1639; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:13655714..13657033 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39033.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.45 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||
| Length | 353 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAIASSSPSS SSNVSVIPTG PQVFISFRGK ELRKGFISFL VPALKKKNIN VFIDEHEVRG KDLISLFRRI GESKIALVIF SEGYTESKWC LDELVQIKKC 101: VDQKKIIAIP IFYKLDPAVV KGLKGKFGDK FRDLIERYHH EPERYQKWTE ALTSVSRTFA LCLPEHSDKS EKDFIRSIIK EVKKALSNIS RERNGDREEI 201: DDCFVVSERK LTTDMYDTPE VSTSTMRKVS SNNGVGVGTF KSQKPNFDDE DDDGDSLLKA LVAKLVASTT SIVAAYAELQ RAHSDAIQAA ETVVVDVKTL 301: SELIRSSNGG GGGSGSGSGS SLENQPRRSK VRKQVWAEVL GISSDSTIIL ECI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)