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AT1G60140.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : trehalose phosphate synthase
Curator
Summary (TAIR10)
Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.
Computational
Description (TAIR10)
trehalose phosphate synthase (TPS10); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 9 (TAIR:AT1G23870.1); Has 4634 Blast hits to 4564 proteins in 1018 species: Archae - 52; Bacteria - 2697; Metazoa - 162; Fungi - 655; Plants - 601; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink).
Protein Annotations
CAZy:GT20EC:2.4.1.15eggNOG:COG0380eggNOG:COG1877
eggNOG:KOG1050EMBL:AC004473EMBL:AF155151EMBL:AK229191
EMBL:CP002684EnsemblPlants:AT1G60140EnsemblPlants:AT1G60140.1entrez:842309
ExpressionAtlas:O80738Gene3D:3.40.50.1000GeneID:842309Genevisible:O80738
GO:GO:0005992GO:GO:0016757Gramene:AT1G60140.1gramene_pathway:2.4.1.15
gramene_pathway:3.1.3.12gramene_pathway:TRESYN-PWYhmmpanther:PTHR10788hmmpanther:PTHR10788:SF14
HOGENOM:HOG000191476InParanoid:O80738InterPro:IPR001830InterPro:IPR003337
InterPro:IPR006379InterPro:IPR023214iPTMnet:O80738KEGG:ath:AT1G60140
KO:K16055OMA:EEDYIWIPaxDb:O80738Pfam:O80738
Pfam:PF00982Pfam:PF02358PhylomeDB:O80738PIR:T02267
PRIDE:O80738PRO:PR:O80738ProteinModelPortal:O80738Proteomes:UP000006548
RefSeq:NP_176221.1SMR:O80738STRING:3702.AT1G60140.1SUPFAM:SSF53756
SUPFAM:SSF56784TAIR:AT1G60140tair10-symbols:ATTPS10tair10-symbols:TPS10
TIGRfam:TIGR00685TIGRfam:TIGR01484TIGRFAMs:TIGR00685TIGRFAMs:TIGR01484
UniGene:At.27896UniProt:O80738UniProt:W8Q795
Coordinates (TAIR10) chr1:-:22177246..22180073
Molecular Weight (calculated) 97329.70 Da
IEP (calculated) 6.60
GRAVY (calculated) -0.22
Length 861 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSKSFGNLL DLASGDLLDI PQTPRYLPRV MTVPGIISDV DGYGISDGDS DVISLPCRER KIIVANFLPL NGKKDSETGK WKFSLDNDSP LLHLKDGFSP
101: ETEVIYVGSL KTHVDVSEQD EVSHNLFEEF NCVATFLPQD VHKKFYLGFC KQQLWPLFHY MLPMCPDHGE RFDRGLWQAY VSANKIFADK VMGVINLEED
201: YIWIHDYHLM VLPTFLRRRF HRVKLGFFLH SPFPSSEIYR TLPVREELLR GLLNCDLIGF HTFDYARHFL SCCCRMLGLE YESKRGHIAL DYLGRTVFLK
301: ILPIGIHMGR LESVLNLPAT AEKLKEIQEK YRGKKIILGV DDMDIFKGLS LKILAFEHLL QQYPSMLGKI VLIQIVNPAR GSGKDVQEAR KETYDTVKRI
401: NERYGSHDYE PVVLIDRPVP RFEKSAYYAL AECCIVNAVR DGMNLVPYKY TVCRQGTPSM NKSLGVSDDL PRTSTLVLSE FIGCSPSLSG AIRVNPWDVD
501: AVADSLYSAI TMSDFEKQLR HKKHFHYIST HDVGYWARSF SQDLERASRD HYSKRCWGVG WGLGFRLVAL SPNFRRLSIE QTVSAYRRSS KRAIFLDYDG
601: TLVPETSIVK DPSAEVISAL KALCSDPNNT IFIVSGRGKV SLSEWLAPCE NLGIAAEHGY FTRWNKSSDW ETSGLSDDLE WKKVVEPIMR LYTETTDGSN
701: IEAKESALVW HHQDADPDFG SCQAKELLDH LETVLVNEPV IVNRGHQIVE VKPQGVSKGL VTGKILSRML EDGIAPDFVV CIGDDRSDEE MFENISTTLS
801: AQSSSMSTEI FACTVGRKPS KAKYFLDEVS DVVKLLQGLA NTSSPKPRYP SHLRVSFESV V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)