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AT5G67360.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:28003327 (2017): extracellular region apoplast
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:24665109 (2014): extracellular region plant-type cell wall
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22363647 (2012): extracellular region apoplast
  • PMID:21109274 (2011): extracellular region
  • PMID:18998720 (2009): extracellular region
  • PMID:16356755 (2006): extracellular region
  • PMID:15694452 (2005): extracellular region
  • PMID:15593128 (2005): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Subtilase family protein
Curator
Summary (TAIR10)
Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.
Computational
Description (TAIR10)
ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G67360-MONOMERBioGrid:22113EC:3.4.21.-eggNOG:COG1404
eggNOG:ENOG410IEMNEMBL:AB007645EMBL:AF065639EMBL:AF360285
EMBL:AY091773EMBL:AY142612EMBL:BT001082EMBL:CP002688
EMBL:X85974EnsemblPlants:AT5G67360EnsemblPlants:AT5G67360.1entrez:836871
Gene3D:3.30.70.80Gene3D:3.40.50.200GeneID:836871Genevisible:O65351
GO:GO:0004252GO:GO:0005576GO:GO:0005618GO:GO:0009505
GO:GO:0010214GO:GO:0048046GO:GO:0048359GO:GO:0080001
Gramene:AT5G67360.1hmmpanther:PTHR10795hmmpanther:PTHR10795:SF335HOGENOM:HOG000238262
InParanoid:O65351InterPro:IPR000209InterPro:IPR003137InterPro:IPR010259
InterPro:IPR015500InterPro:IPR023828KEGG:ath:AT5G67360MEROPS:S08.112
OMA:AGHIDATPANTHER:PTHR10795PaxDb:O65351Pfam:O65351
Pfam:PF00082Pfam:PF02225Pfam:PF05922PhylomeDB:O65351
PIR:JC7519PIR:S52770PRIDE:O65351PRINTS:PR00723
PRO:PR:O65351PROSITE:PS00138ProteinModelPortal:O65351Proteomes:UP000006548
RefSeq:NP_569048.1scanprosite:PS00138SMR:O65351STRING:3702.AT5G67360.1
SUPFAM:SSF52743TAIR:AT5G67360tair10-symbols:ARA12UniGene:At.23238
UniGene:At.67722UniGene:At.71531UniProt:O65351
Coordinates (TAIR10) chr5:-:26872192..26874465
Molecular Weight (calculated) 79419.60 Da
IEP (calculated) 6.31
GRAVY (calculated) -0.03
Length 757 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSSFLSSTA FFLLLCLGFC HVSSSSSDQG TYIVHMAKSQ MPSSFDLHSN WYDSSLRSIS DSAELLYTYE NAIHGFSTRL TQEEADSLMT QPGVISVLPE
101: HRYELHTTRT PLFLGLDEHT ADLFPEAGSY SDVVVGVLDT GVWPESKSYS DEGFGPIPSS WKGGCEAGTN FTASLCNRKL IGARFFARGY ESTMGPIDES
201: KESRSPRDDD GHGTHTSSTA AGSVVEGASL LGYASGTARG MAPRARVAVY KVCWLGGCFS SDILAAIDKA IADNVNVLSM SLGGGMSDYY RDGVAIGAFA
301: AMERGILVSC SAGNAGPSSS SLSNVAPWIT TVGAGTLDRD FPALAILGNG KNFTGVSLFK GEALPDKLLP FIYAGNASNA TNGNLCMTGT LIPEKVKGKI
401: VMCDRGINAR VQKGDVVKAA GGVGMILANT AANGEELVAD AHLLPATTVG EKAGDIIRHY VTTDPNPTAS ISILGTVVGV KPSPVVAAFS SRGPNSITPN
501: ILKPDLIAPG VNILAAWTGA AGPTGLASDS RRVEFNIISG TSMSCPHVSG LAALLKSVHP EWSPAAIRSA LMTTAYKTYK DGKPLLDIAT GKPSTPFDHG
601: AGHVSPTTAT NPGLIYDLTT EDYLGFLCAL NYTSPQIRSV SRRNYTCDPS KSYSVADLNY PSFAVNVDGV GAYKYTRTVT SVGGAGTYSV KVTSETTGVK
701: ISVEPAVLNF KEANEKKSYT VTFTVDSSKP SGSNSFGSIE WSDGKHVVGS PVAISWT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)