AT5G63770.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.925 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : diacylglycerol kinase 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
diacylglycerol kinase 2 (DGK2); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: response to cold, activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, response to wounding, root development, leaf development; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase1 (TAIR:AT5G07920.1); Has 2350 Blast hits to 1757 proteins in 372 species: Archae - 0; Bacteria - 463; Metazoa - 1391; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:+:25519293..25522404 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 79409.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.46 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 712 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MMEVGFSLIQ WLISSGADSP FIFGWLVTGS VGLLAVIYTF LKWQKKTSLN WVKAAAREKK KVWKRLRVPL SHHQWTDDYG YGQQPSTCCV CLYSLVPGQN 101: VSNKASLSIP VHRCAVCGVA AHFYCSSSAA KDCKCVAQAG SDHVRHHWSE RWVNMDDNAD MTAFCFYCDE PCGIPFIEAS PMWHCLWCQR LIHVKCHMIM 201: SKESGDACDL GSLRRVILSP VHVKLNEANG VDGVLTTIKN ELASIRGHVR RKRHRGKNGN GQSLNGKLLE DSVSDPVKTV VNGLVVKKLR RDRSIDCLKQ 301: VSDMPNAKGL QNGIGGHKRN KSAALNFMKK FSLVDLPPDA RPLLVFINAK SGGQLGPFLH RRLNMLLNPV QVFELGSCQG PDAGLDLCSK VKYFRVLVCG 401: GDGTVAWVLD AIEKRNFESP PPVAILPLGT GNDLSRVLQW GRGISVVDGQ GSLRTFLQDI DHAAVTMLDR WSVKIVEEST EKFPAREGHK FMMNYLGIGC 501: DAKVAYEFHM MRQEKPEKFC SQFVNKLRYA KEGARDIMDR ACADLPWQVW LEVDGKDIEI PKDSEGLIVL NIGSYMGGVD LWQNDYEHDD NFSIQCMHDK 601: TLEVVCVRGA WHLGKLQVGL SQARRLAQGK VIRIHVSSPF PVQIDGEPFI QQPGCLEITH HGQVFMLRRA SDEPRGHAAA IMNEVLLDAE CKGVINASQK 701: KVLLQQMALH LS |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)