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AT5G50810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:22923678 (2012): mitochondrion
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21311031 (2011): mitochondrion
  • PMID:14730085 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : translocase inner membrane subunit 8
Curator
Summary (TAIR10)
Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus.
Computational
Description (TAIR10)
translocase inner membrane subunit 8 (TIM8); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion, protein import into mitochondrial inner membrane; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial intermembrane space; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like (InterPro:IPR004217); Has 688 Blast hits to 688 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 361; Fungi - 183; Plants - 116; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
Protein Annotations
BioGrid:20399DNASU:835153eggNOG:ENOG41126D5eggNOG:KOG3489
EMBL:AB025617EMBL:AF150083EMBL:AY087301EMBL:BT002881
EMBL:BT004405EMBL:CP002688EnsemblPlants:AT5G50810EnsemblPlants:AT5G50810.1
entrez:835153Gene3D:1.10.287.810GeneID:835153Genevisible:Q9XGY4
GO:GO:0005739GO:GO:0005758GO:GO:0015031GO:GO:0046872
Gramene:AT5G50810.1HOGENOM:HOG000115758InParanoid:Q9XGY4IntAct:Q9XGY4
InterPro:IPR004217KEGG:ath:AT5G50810KO:K17780OMA:SCVERFI
PaxDb:Q9XGY4Pfam:PF02953Pfam:Q9XGY4PhylomeDB:Q9XGY4
PRIDE:Q9XGY4PRO:PR:Q9XGY4ProteinModelPortal:Q9XGY4Proteomes:UP000006548
RefSeq:NP_199894.1SMR:Q9XGY4STRING:3702.AT5G50810.1SUPFAM:SSF144122
TAIR:AT5G50810tair10-symbols:TIM8UniGene:At.22723UniProt:Q9XGY4
Coordinates (TAIR10) chr5:-:20675875..20676505
Molecular Weight (calculated) 8750.63 Da
IEP (calculated) 7.13
GRAVY (calculated) -0.33
Length 77 amino acids
Sequence (TAIR10)
(BLAST)
1: MDPSMANNPE LLQFLAQEKE RAMVNEMVSK MTSVCWDKCI TSAPGSKFSS SESSCLTHCA QRYMDMSMII MKRFNSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)