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AT5G50330.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.671
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24810.2); Has 9594 Blast hits to 9572 proteins in 1815 species: Archae - 124; Bacteria - 4421; Metazoa - 409; Fungi - 573; Plants - 708; Viruses - 16; Other Eukaryotes - 3343 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0661eggNOG:KOG1235EMBL:AK227819EMBL:BT050413
EMBL:CP002688EnsemblPlants:AT5G50330EnsemblPlants:AT5G50330.1entrez:835099
ExpressionAtlas:Q0WSU9GeneID:835099GO:GO:0004672GO:GO:0005524
GO:GO:0009536Gramene:AT5G50330.1hmmpanther:PTHR10566hmmpanther:PTHR10566:SF72
HOGENOM:HOG000029406InterPro:IPR000719InterPro:IPR004147InterPro:IPR011009
ncoils:CoilOMA:THLITREPfam:PF00069Pfam:PF03109
Pfscan:PS50011PhylomeDB:Q0WSU9PROSITE:PS50011Proteomes:UP000006548
RefSeq:NP_199844.3SMR:Q0WSU9STRING:3702.AT5G50330.1SUPFAM:SSF56112
TAIR:AT5G50330UniGene:At.29738UniProt:Q0WSU9
Coordinates (TAIR10) chr5:-:20485406..20488563
Molecular Weight (calculated) 54632.60 Da
IEP (calculated) 9.67
GRAVY (calculated) -0.26
Length 479 amino acids
Sequence (TAIR10)
(BLAST)
001: MHGFDFKEIQ EKISDSFRPW QRSFQFWVRA TNIYTGYKVF QLRVSLVKDA KKQEEMWERQ HEQAADKIYF MCSDLGGFFL KIAQLLAKPD MAPAAWVKKL
101: VTLCDQAPAT PFDAIQLVLE KELGKSIGEI FETFDEKPLG SASIAQVHRA IVKGNKMNVV VKVQHPGIER LMMTDIRNLQ LFALYMQRTD IKFDLHSITK
201: EMEKQIGYEF DFKREANAME RIRCFLYENN KKSPVLVPRV LRDMVTKRVL VMEYINGIPI LSIGDEMAKR GINPHGKIAE AAKHNILNSL SRAYGQMILK
301: SGFFHADPHP GNILICKGQE VALLDYGQVK ELPNKLRLGY ANLVIAMADN NASRVSQSFW EMGLHTVAKC ENEQQELLRL AQTLFDTKMP TGQTVLQPFS
401: DDSSIKKIAV ETFPEELFSV LRTVVLLRGL SVGMGVNYSC AEQWRAMAEE ALLASGRVTR DGKERSRRRA SLRRLRTGS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)