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AT5G46850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.718
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EMBL:AB022221EMBL:CP002688EnsemblPlants:AT5G46850EnsemblPlants:AT5G46850.1
entrez:834729ExpressionAtlas:Q9LUK5GeneID:834729GO:GO:0005789
GO:GO:0006506GO:GO:0016021Gramene:AT5G46850.1hmmpanther:PTHR28650
HOGENOM:HOG000029202InterPro:IPR013233Pfam:PF08320PhylomeDB:Q9LUK5
Proteomes:UP000006548RefSeq:NP_199497.1SMART:SM00780TAIR:AT5G46850
TMHMM:TMhelixUniGene:At.22922UniGene:At.50510UniProt:Q9LUK5
Coordinates (TAIR10) chr5:+:19010714..19012010
Molecular Weight (calculated) 33704.70 Da
IEP (calculated) 6.67
GRAVY (calculated) -0.31
Length 296 amino acids
Sequence (TAIR10)
(BLAST)
001: MGFFRAATHP DDLRRRVPSP AIMVGTNYRD SHEFFDSDTI CISDQYIMES YFTTYTSLDD SEFRNFLLLQ QCSDKVPTQD SNIVPATSFI QHRNITGEGS
101: HRNLITSIKL LLHHSESQFR ELVIVERLPL GVFADPFELQ SLQQRRAFSD VSVFGDTNLE LPSFRSNRSV VEIHVEISSR NYENGEISFK LPLHARYQPL
201: DDSGYSRVEF GEPDLFLCSS HVQNQRRERR RCLVLSIGRS KTETRSVFWD IPAGIRGHTE YVSALTFAAA VFSAFSILVA SVLSSKGESC KNLKQS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)