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AT5G45590.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Ribosomal protein L35
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Ribosomal protein L35; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35 (InterPro:IPR021137); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1V7eggNOG:ENOG410Y6A2EMBL:AK117667EMBL:AY087943
EMBL:BT005062EMBL:CP002688EnsemblPlants:AT5G45590EnsemblPlants:AT5G45590.1
entrez:834597GeneID:834597GO:GO:0003735GO:GO:0005840
GO:GO:0006412Gramene:AT5G45590.1hmmpanther:PTHR36400InterPro:IPR021137
KEGG:ath:AT5G45590OMA:GTIRRWKPfam:PF01632PhylomeDB:Q8LAA7
Proteomes:UP000006548RefSeq:NP_568647.1SMR:Q8LAA7STRING:3702.AT5G45590.1
SUPFAM:SSF143034TAIR:AT5G45590UniGene:At.43569UniProt:Q8LAA7
Coordinates (TAIR10) chr5:-:18484643..18486227
Molecular Weight (calculated) 20063.60 Da
IEP (calculated) 12.30
GRAVY (calculated) -0.76
Length 173 amino acids
Sequence (TAIR10)
(BLAST)
001: MQRFCTKLRS ISLQSNRNLS FYGASPHRLI HHSPSPSRHL TTTTLGFANS TKWSFVPAAG VFPSNVSSMG TTFVPHHFVQ VRNITSKEKM AKWKKKWRPR
101: TPITSKVKKV KIKFYSSFKD RFKPLNDGTI RRWKEGKRHN AHLKSKKSKR RLRQPGLVPP AYAKVMKKLN FCN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)