AT5G44450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.978 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : methyltransferases | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF858, methyltransferase-like (InterPro:IPR008576); Has 501 Blast hits to 497 proteins in 206 species: Archae - 0; Bacteria - 15; Metazoa - 174; Fungi - 136; Plants - 83; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:17914360..17916017 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37745.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.38 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 334 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSSLHSPFV SIGHFHCHHN NQNHISPPPS TTTTLASPPY RYQQRKEIRS VLTLSSNSMD ICGVDSEGKE FNSVQEMWRE EIGEGDETKK TQWYRDGVSY 101: WEGVEASVDG VLGGYGHVND ADIIGSEVFL KTLLQERLVN NVGANQHLVA LDCGSGIGRI TKNLLIRYFN EVDLLEPVAQ FLDAARENLA SAGSETHKAT 201: NFFCVPLQEF TPAAGRYDVI WVQWCIGHLT DNDFVSFFNR AKGYLKPGGF FVVKENLAKN GFVLDKEDHS ITRSDPYFKQ LFRQCGLHLY RTKDQKGLPQ 301: ELFAVKMYAL TVDTPPKIHR TRSKTRSNRP QIIK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)