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AT5G39080.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.502
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G39050.1); Has 2008 Blast hits to 1990 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 42; Plants - 1965; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G39080-MONOMEReggNOG:ENOG410JFVYeggNOG:ENOG410YB7XEMBL:AB016892
EMBL:AK226944EMBL:BT003341EMBL:BT008760EMBL:CP002688
EnsemblPlants:AT5G39080EnsemblPlants:AT5G39080.1entrez:833900Gene3D:3.30.559.10
GeneID:833900GO:GO:0016747Gramene:AT5G39080.1hmmpanther:PTHR31625
hmmpanther:PTHR31625:SF5InterPro:IPR003480InterPro:IPR023213KEGG:ath:AT5G39080
OMA:DSIEEWDPfam:PF02458PhylomeDB:Q9FID2Proteomes:UP000006548
RefSeq:NP_198724.1SMR:Q9FID2STRING:3702.AT5G39080.1SUPFAM:SSF52777
TAIR:AT5G39080UniGene:At.30363UniProt:Q9FID2
Coordinates (TAIR10) chr5:+:15641681..15643072
Molecular Weight (calculated) 51487.50 Da
IEP (calculated) 5.31
GRAVY (calculated) -0.07
Length 463 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSSLNIIEV ARVTPSNSDS AESLSLPLTY FDLIYYKLRA VERVIFYRIT NVTRPFFDSV IVPNLKTSLS SCLSHYLPLA GKLIWEPLDH KPTIVYSQND
101: DVSFSVAETN ADFSSLSGNE PFPSTELYPL VPALQSSDDS ASIVSFQVTL FPNQGFCIGV SAHHAVLDGK TTTMFLKSWA HICKHQDFSL PQDLIPTYDR
201: TVIKSPTDSE NKVLNEWRSF TKILAGGKEP ANPKSLKLNP SFEIGPDVVR YTLQLTREDI QTLRERLKRE VSSSSSSTSS SKELRLSTFV IVYSYVLVCI
301: IRARGGEPHR PVGYAFSVDC RSLMNPPTPN YFGNCIAGCS RMMLTAKMFM GEEGLLAAAT MVSDSIEEWD ESFAWKIPDF VAYATLPPET QLILVSGSNR
401: FGVYELDFGW GRPDKVMVVS ISPGNGISMA ESRDQNGSVE IGFSLKKHEM DTLIDLLHCE LTI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)