AT5G37650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Family of unknown function (DUF577) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Family of unknown function (DUF577); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF577 (InterPro:IPR007598); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF577) (TAIR:AT5G37400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:14954011..14955834 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 71045.50 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.42 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||
| Length | 607 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKAREILTSP NLDGLTMIVD NLYTRKQSED YKTARTLYDL FVSNFPNCLT LKLLKIYLSS SDQVLRLRSI GHLSETLPGL RNRNFKLSLV ALHEIKPLLI 101: SCLTRQNPRK CDTNCLRVIV SFVAENVMSF YNGRWEELSE YILLLVNQDP IRAFSYFIEL PLLYEGFINR FLEKLREEVY KVLLHPEKNK EEAWVLALTS 201: AVKMGIEVSD SVMRREILHN VMKSAFEVMW LGMEREFAIR GLQYLDKYLA KEAKLCKWSS KQCGFVAAFA YAIAGVGTST KEEAKKIFVM VTNMDKYVLN 301: PAFKLEHFRV DNQDLGVDSD RELYYMFRQC TPMEVLSFFA IPGSDYRSRE IAIKRLYDSL CDHTSSQWEI DVSEIRGLQP LLITCLKEEG LPENIYKILG 401: QVVFHVAQET FNYEKDPWFD LWDYIGSESK VEFEKAVYIF QRLTMWLEFK DIVVPAITNL LPEINRNLTP PRELLVDNSR WVLAFTGAYC SAIHLLEVKS 501: HAGYVKEIAY KMIDSVRELV ERGMEVGLVT RAFRDLESIV KKQWVWYMTC EYRFLKGLLW RLYAINGMKR ESKYVLWRIN VDIERSVDEN LKVLPKSEFD 601: WLNQPKP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)