AT5G10010.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64910.1); Has 33260 Blast hits to 16857 proteins in 1270 species: Archae - 88; Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants - 1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:3128098..3131452 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50519.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.62 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.03 | ||||||||||||||||||||||||||||
| Length | 434 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKKGAKRKGV SKAGRKAAVA ETQNDEVIEE TTKTTQEESQ QHEEEVVDEV KENGEEEEAK GDQEEEEDAK PDSLEEDEEN QEDEVKAEEV KEEVEKKPVA 101: RRGGKRKRAT KKDTEIKDEK KPVPKAKKPR AAKVKEEPVY FEEKRSLEDL WKVAFPVGTE WDQLDALYEF NWDFQNLEEA LEEGGKLYGK KVYVFGCTEP 201: QLVPYKGANK IVHVPAVVVI ESPFPPSDKI GITSVQREVE EIIPMKKMKM DWLPYIPIEK RDRQVDKMNS QIFTLGCTQR RSALRHMKED QLKKFEYCLP 301: YFYQPFKEDE LEQSTEVQIM FPSEPPVVCE FDWEFDELQE FVDKLVEEEA LPAEQADEFK EYVKEQVRAA KKANREAKDA RKKAIEEMSE DTKQAFQKMK 401: FYKFYPQPSP DTPDVSGVQS PFINRYYGKA HEVL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)