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AT5G05920.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : deoxyhypusine synthase
Curator
Summary (TAIR10)
Encodes a deoxyhypusine synthase.
Computational
Description (TAIR10)
deoxyhypusine synthase (DHS); INVOLVED IN: embryo sac development, peptidyl-lysine modification to hypusine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyhypusine synthase (InterPro:IPR002773); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G05920-MONOMERBioCyc:ARA:GQT-45-MONOMEREC:2.5.1.46eggNOG:COG1899
eggNOG:KOG2924EMBL:AB017060EMBL:AF296078EMBL:AF361828
EMBL:AY056066EMBL:AY087829EMBL:CP002688EnsemblPlants:AT5G05920
EnsemblPlants:AT5G05920.1entrez:830477ExpressionAtlas:Q9FI94Gene3D:3.40.910.10
GeneID:830477Genevisible:Q9FI94GO:GO:0008612GO:GO:0009553
GO:GO:0034038GO:GO:0050983hmmpanther:PTHR11703HOGENOM:HOG000228838
InParanoid:Q9FI94InterPro:IPR002773InterPro:IPR029035iPTMnet:Q9FI94
OMA:SWGKIKEPANTHER:PTHR11703PaxDb:Q9FI94Pfam:PF01916
Pfam:Q9FI94PhylomeDB:Q9FI94PRIDE:Q9FI94PRO:PR:Q9FI94
ProteinModelPortal:Q9FI94Proteomes:UP000006548Reactome:R-ATH-204626RefSeq:NP_196211.1
SMR:Q9FI94STRING:3702.AT5G05920.1SUPFAM:SSF52467TAIR:AT5G05920
tair10-symbols:DHStair10-symbols:EDA22TIGRfam:TIGR00321TIGRFAMs:TIGR00321
UniGene:At.9443UniPathway:UPA00354UniProt:Q9FI94
Coordinates (TAIR10) chr5:-:1777781..1779699
Molecular Weight (calculated) 41065.90 Da
IEP (calculated) 4.88
GRAVY (calculated) -0.26
Length 368 amino acids
Sequence (TAIR10)
(BLAST)
001: MEDDRVFSSV HSTVFKESES LEGKCDKIEG YDFNQGVDYP KLMRSMLTTG FQASNLGEAI DVVNQMLDWR LADETTVAED CSEEEKNPSF RESVKCKIFL
101: GFTSNLVSSG VRDTIRYLVQ HHMVDVIVTT TGGVEEDLIK CLAPTFKGDF SLPGAYLRSK GLNRIGNLLV PNDNYCKFED WIIPIFDEML KEQKEENVLW
201: TPSKLLARLG KEINNESSYL YWAYKMNIPV FCPGLTDGSL GDMLYFHSFR TSGLIIDVVQ DIRAMNGEAV HANPKKTGMI ILGGGLPKHH ICNANMMRNG
301: ADYAVFINTG QEFDGSDSGA RPDEAVSWGK IRGSAKTVKV YCDATIAFPL LVAETFATKR DQTCESKT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)