AT4G36520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.991 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Chaperone DnaJ-domain superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 187564 Blast hits to 104912 proteins in 3501 species: Archae - 1251; Bacteria - 31029; Metazoa - 79517; Fungi - 15919; Plants - 9547; Viruses - 688; Other Eukaryotes - 49613 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17230589..17235435 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 162922.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.73 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.26 | ||||||||||||||||||||||||||||||||
| Length | 1422 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MENLSHSRNP NRSSSLPKKP YNGNNTTGGF SYNSGKTANT TTTTTYDDVF GGPPRFGAPT LSPRLEDYCE IFSGFNGSSR AAVSSIPVLD LPLVDDRDVY 0101: FDVRSQGFDY REVFGGFNDL DLAPSYEELF LQQKSTTVVG DGDSSDDAWT PEEVESCSGG TEHSGKSPCF SNGRDSYDSI DGSTEFNISY NKASQISGGE 0201: TNMSSSGVIR VADLGAIPGY TVAVDGTTKL NKVTGPSSVG RGTSRFVFED KYYSSEPFVT VSEIGLKTHP TGIPPPSRAA PILKSDFRSS ASNSKTTGSQ 0301: GSVDSSSSPT FFDVEVDANS AAVREAMLKA EAKLKSAKEL LERKRDVART TSTPSSTKNR IKEEGKSSYA AGLPVVKSNI DVARKSLKDK RGSKSLSSQG 0401: SATSDGNDEW KEANNQYVEL VRTELPRNAD ENSGGKDVSI PLNAEFFDQE LTWAGNVDWE KQRRRAKGDR EDHEARKLPK HSGTRKLSSR HKRHENKLAE 0501: KAPEEPKIEK SRHVEMGNDL PDHGGIVKHR NLLKPEENKL FTEKPAKQKK ELLCEEKTKR IQNQQLDKKT HQKAAETNQE CVYDWEQNAR KLREALGNES 0601: TLEVSVELNG NGKKMEMRSQ SETKLNEPLK RMEEETRIKE ARLREENDRR ERVAVEKAEN EKRLKAALEQ EEKERKIKEA REKAENERRA VEAREKAEQE 0701: RKMKEQQELE LQLKEAFEKE EENRRMREAF ALEQEKERRI KEAREKEENE RRIKEAREKA ELEQRLKATL EQEEKERQIK ERQEREENER RAKEVLEQAE 0801: NERKLKEALE QKENERRLKE TREKEENKKK LREAIELEEK EKRLIEAFER AEIERRLKED LEQEEMRMRL QEAKERERLH RENQEHQENE RKQHEYSGEE 0901: SDEKERDACE MEKTCETTKE AHGEQSSNES LSDTLEENES IDNDVSVNKQ KKEEEGTRQR ESMSAETCPW KVFEKTLKDA SQKEGTNEMD ADTRLFERNE 1001: ETPRLGENGG CNQQNGESGE ESTSVTENII GGKLEQKSKN SETSKDASVL KRVSGLKTEV EERLEDVVGV GRDQRNPEES KSAPKTSYGF RNHEYKFTHQ 1101: QERGNIYETQ AGLNQDAKVE RPLPSRVSVQ REKEAERLKR ERDLEMEQLR KVEEERERER EREKDRMAFD QRALADARER LEKACAEARE KSLPDKLSME 1201: ARLRAERAAV ERATSEARDR AAEKAAFEAR ERMERSVSDK QSQSSGFFGE RMEISLSDKQ FQNSVSFGAS RYQDSHGTEG ESPQRYTSRL ERHQRTADRV 1301: AKALAEKNMR DLVAQREQAE RIRIAETLDT EVKRWSSGKE GNIRALLSTL QYILGPESGW QPLPLTEVIT SAAVKRAYRK ATLCVHPDKL QQRGANIHQK 1401: YICEKVFDLL KEAWNRFNSE GR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)