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AT4G34970.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.935
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : actin depolymerizing factor 9
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
actin depolymerizing factor 9 (ADF9); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 5 (TAIR:AT2G16700.1); Has 1376 Blast hits to 1375 proteins in 262 species: Archae - 0; Bacteria - 3; Metazoa - 546; Fungi - 141; Plants - 513; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG41122P5eggNOG:KOG1735EMBL:AL022023EMBL:AL161586
EMBL:BT029315EMBL:CP002687EnsemblPlants:AT4G34970EnsemblPlants:AT4G34970.1
entrez:829649Gene3D:3.40.20.10GeneID:829649Genevisible:O49606
GO:GO:0015629GO:GO:0030041GO:GO:0030042Gramene:AT4G34970.1
hmmpanther:PTHR11913hmmpanther:PTHR11913:SF16HOGENOM:HOG000039697InParanoid:O49606
InterPro:IPR002108InterPro:IPR017904InterPro:IPR029006KEGG:ath:AT4G34970
KO:K05765OMA:CKKSFMEPANTHER:PTHR11913PaxDb:O49606
Pfam:O49606Pfam:PF00241Pfscan:PS51263PIR:T05767
PRIDE:O49606PRO:PR:O49606PROSITE:PS51263ProteinModelPortal:O49606
Proteomes:UP000006548RefSeq:NP_195223.2SMART:SM00102SMR:O49606
STRING:3702.AT4G34970.1SUPFAM:SSF55753TAIR:AT4G34970tair10-symbols:ADF9
UniGene:At.31455UniProt:O49606
Coordinates (TAIR10) chr4:+:16653784..16654593
Molecular Weight (calculated) 16370.60 Da
IEP (calculated) 8.03
GRAVY (calculated) -0.55
Length 141 amino acids
Sequence (TAIR10)
(BLAST)
001: MALKTATSGM WMTDDCKKSF MEMKWKKVHR YVVYKLEEKS RKVTVDKVGA AGESYDDLAA SLPEDDCRYA VFDFDYVTVD NCRMSKIFFI TWSPEASRIR
101: EKMMYATSKS GLRRVLDGVH YELQATDPTE MGFDKIQDRA K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)