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AT4G30010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:23750852 (2013): mitochondrion
  • PMID:22923678 (2012): mitochondrion
  • PMID:21841088 (2011): mitochondrion
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21472856 (2011): mitochondrion
  • PMID:19329564 (2009): peroxisome
  • PMID:18189341 (2008): mitochondrion
  • PMID:16618929 (2006): unclear
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J219eggNOG:ENOG410Y3AQEMBL:AF380650EMBL:AL078464
EMBL:AL161576EMBL:AY054143EMBL:AY086876EMBL:CP002687
EnsemblPlants:AT4G30010EnsemblPlants:AT4G30010.1entrez:829124GeneID:829124
GO:GO:0005739GO:GO:0005753GO:GO:0009536Gramene:AT4G30010.1
hmmpanther:PTHR36059hmmpanther:PTHR36059:SF1HOGENOM:HOG000238827IntAct:Q9SZV4
KEGG:ath:AT4G30010OMA:VCFGGMIPhylomeDB:Q9SZV4PIR:T08977
Proteomes:UP000006548RefSeq:NP_194730.1STRING:3702.AT4G30010.1SwissPalm:Q9SZV4
TAIR:AT4G30010UniGene:At.20499UniProt:Q9SZV4
Coordinates (TAIR10) chr4:+:14672947..14673219
Molecular Weight (calculated) 10439.60 Da
IEP (calculated) 9.68
GRAVY (calculated) -0.58
Length 90 amino acids
Sequence (TAIR10)
(BLAST)
1: MALRRVYSEI RGKKVTELPG YIKSTFSMET VKTSVKRGLD NYNEKYIQTS SVDPILHICF YGMAFSYLVA LPNERRHLEH QQHAKEHGGH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)