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AT4G29840.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30394608 (2019): plastid
  • PMID:30135097 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21841088 (2011): mitochondrion
  • PMID:21531424 (2011): plastid
  • PMID:21166475 (2011): cytosol
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pyridoxal-5'-phosphate-dependent enzyme family protein
Curator
Summary (TAIR10)
threonine synthase
Computational
Description (TAIR10)
METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink).
Protein Annotations
BioGrid:14393BRENDA:4.2.3.1EC:4.2.3.1eggNOG:COG0498
eggNOG:ENOG410IITNEMBL:AB027151EMBL:AL050352EMBL:AL161575
EMBL:CP002687EMBL:L41666EnsemblPlants:AT4G29840EnsemblPlants:AT4G29840.1
entrez:829106EvolutionaryTrace:Q9S7B5GeneID:829106Genevisible:Q9S7B5
GO:GO:0004795GO:GO:0005829GO:GO:0009088GO:GO:0009507
GO:GO:0009570GO:GO:0030170Gramene:AT4G29840.1gramene_pathway:4.2.3.1
gramene_pathway:HOMOSER-THRESYN-PWYgramene_plant_reactome:1119262gramene_plant_reactome:6874871hmmpanther:PTHR10314
hmmpanther:PTHR10314:SF125HOGENOM:HOG000076502InParanoid:Q9S7B5InterPro:IPR000634
InterPro:IPR001926InterPro:IPR004450KEGG:ath:AT4G29840KO:K01733
OMA:KAKEANCPaxDb:Q9S7B5PDB:1E5XPDB:2C2B
PDB:2C2GPDBsum:1E5XPDBsum:2C2BPDBsum:2C2G
Pfam:PF00291Pfam:Q9S7B5PhylomeDB:Q9S7B5PIR:T08545
PRIDE:Q9S7B5PRO:PR:Q9S7B5PROSITE:PS00165ProteinModelPortal:Q9S7B5
Proteomes:UP000006548RefSeq:NP_194713.1scanprosite:PS00165SMR:Q9S7B5
STRING:3702.AT4G29840.1SUPFAM:SSF53686SwissPalm:Q9S7B5TAIR:AT4G29840
tair10-symbols:MTO2tair10-symbols:TSTIGRfam:TIGR00260TIGRFAMs:TIGR00260
UniGene:At.23602UniGene:At.72983UniPathway:UPA00050UniProt:Q9S7B5
Coordinates (TAIR10) chr4:-:14599434..14601014
Molecular Weight (calculated) 57780.10 Da
IEP (calculated) 7.45
GRAVY (calculated) -0.14
Length 526 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSCLFNAS VSSLNPKQDP IRRHRSTSLL RHRPVVISCT ADGNNIKAPI ETAVKPPHRT EDNIRDEARR NRSNAVNPFS AKYVPFNAAP GSTESYSLDE
101: IVYRSRSGGL LDVEHDMEAL KRFDGAYWRD LFDSRVGKST WPYGSGVWSK KEWVLPEIDD DDIVSAFEGN SNLFWAERFG KQFLGMNDLW VKHCGISHTG
201: SFKDLGMTVL VSQVNRLRKM KRPVVGVGCA STGDTSAALS AYCASAGIPS IVFLPANKIS MAQLVQPIAN GAFVLSIDTD FDGCMKLIRE ITAELPIYLA
301: NSLNSLRLEG QKTAAIEILQ QFDWQVPDWV IVPGGNLGNI YAFYKGFKMC QELGLVDRIP RMVCAQAANA NPLYLHYKSG WKDFKPMTAS TTFASAIQIG
401: DPVSIDRAVY ALKKCNGIVE EATEEELMDA MAQADSTGMF ICPHTGVALT ALFKLRNQGV IAPTDRTVVV STAHGLKFTQ SKIDYHSNAI PDMACRFSNP
501: PVDVKADFGA VMDVLKSYLG SNTLTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)