suba logo
AT4G29130.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : mitochondrion 14671022
AmiGO : mitochondrion 16618929
AmiGO : mitochondrion 16920781
AmiGO : mitochondrion 18481082
AmiGO : nucleus 17081979
AmiGO : plastid 16618929
SwissProt : mitochondrion 16381842
SwissProt : nucleus 16381842
TAIR : nucleus 17081979
TAIR : plasma membrane 17151019
TAIR : plastid 16618929
TAIR : mitochondrion 16920781
TAIR : vacuole 15539469
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31932409 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:27122571 (2016): mitochondrion
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid plastid envelope plastid outer membrane
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22968828 (2012): mitochondrion
  • PMID:22923678 (2012): mitochondrion
  • PMID:22574745 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21531424 (2011): plastid
  • PMID:21472856 (2011): mitochondrion
  • PMID:21433285 (2011): plasma membrane
  • PMID:21311031 (2011): mitochondrion
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): unclear
  • PMID:14671022 (2004): mitochondrion
FP Images

onion epidermal cell layer (peroxisomal marker) v1

At4g-GFP-29130
(full-length)
RFP-peroxisomal markeroverlay

Images by John Bussel

onion epidermal cell layer (peroxisomal marker) v2

At4g-GFP-29130
(full-length)
RFP-peroxisomal markeroverlay

Images by John Bussel
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : hexokinase 1
Curator
Summary (TAIR10)
Encodes a hexokinase (HXK1) in the plant glucose-signaling network. Functions as a glucose sensor to interrelate nutrient, light, and hormone signaling networks for controlling growth and development in response to the changing environment.
Computational
Description (TAIR10)
hexokinase 1 (HXK1); FUNCTIONS IN: fructokinase activity, hexokinase activity, glucokinase activity, zinc ion binding, ATP binding; INVOLVED IN: sugar mediated signaling pathway, hexose catabolic process, glucose mediated signaling pathway, programmed cell death; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 2 (TAIR:AT2G19860.1); Has 2426 Blast hits to 2148 proteins in 325 species: Archae - 0; Bacteria - 92; Metazoa - 1300; Fungi - 606; Plants - 290; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G29130-MONOMEReggNOG:COG5026eggNOG:KOG1369EMBL:AK230265
EMBL:CP002687EnsemblPlants:AT4G29130EnsemblPlants:AT4G29130.1entrez:829034
ExpressionAtlas:Q0WLE0GeneID:829034GO:GO:0001678GO:GO:0004396
GO:GO:0005524GO:GO:0005536GO:GO:0005623GO:GO:0006096
GO:GO:0010182GO:GO:0016021Gramene:AT4G29130.1gramene_pathway:2.7.1.1
gramene_pathway:2.7.1.2gramene_pathway:2.7.1.4gramene_pathway:PWY-5661gramene_pathway:PWY-621
gramene_pathway:PWY-842gramene_pathway:PWY0-1182InterPro:IPR001312InterPro:IPR019807
InterPro:IPR022672InterPro:IPR022673KEGG:00010+2.7.1.1KEGG:00051+2.7.1.1
KEGG:00052+2.7.1.1KEGG:00500+2.7.1.1KEGG:00520+2.7.1.1KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1KEGG:ath:AT4G29130KO:K00844OMA:HRMRCSG
PaxDb:Q0WLE0Pfam:PF00349Pfam:PF03727Pfam:Q42525
Pfscan:PS51748PhylomeDB:Q0WLE0PRIDE:Q0WLE0PROSITE:PS00378
PROSITE:PS51748ProteinModelPortal:Q0WLE0Reactome:R-ATH-170822RefSeq:NP_194642.1
scanprosite:PS00378SMR:Q0WLE0STRING:3702.AT4G29130.1SUPFAM:SSF53067
TAIR:AT4G29130tair10-symbols:ATHXK1tair10-symbols:GIN2tair10-symbols:HXK1
TMHMM:TMhelixUniGene:At.24726UniGene:At.70249UniProt:Q0WLE0
UniProt:Q42525
Coordinates (TAIR10) chr4:-:14352338..14354865
Molecular Weight (calculated) 53710.10 Da
IEP (calculated) 6.00
GRAVY (calculated) 0.06
Length 496 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKVAVGATV VCTAAVCAVA VLVVRRRMQS SGKWGRVLAI LKAFEEDCAT PISKLRQVAD AMTVEMHAGL ASDGGSKLKM LISYVDNLPS GDEKGLFYAL
101: DLGGTNFRVM RVLLGGKQER VVKQEFEEVS IPPHLMTGGS DELFNFIAEA LAKFVATECE DFHLPEGRQR ELGFTFSFPV KQTSLSSGSL IKWTKGFSIE
201: EAVGQDVVGA LNKALERVGL DMRIAALVND TVGTLAGGRY YNPDVVAAVI LGTGTNAAYV ERATAIPKWH GLLPKSGEMV INMEWGNFRS SHLPLTEFDH
301: TLDFESLNPG EQILEKIISG MYLGEILRRV LLKMAEDAAF FGDTVPSKLR IPFIIRTPHM SAMHNDTSPD LKIVGSKIKD ILEVPTTSLK MRKVVISLCN
401: IIATRGARLS AAGIYGILKK LGRDTTKDEE VQKSVIAMDG GLFEHYTQFS ECMESSLKEL LGDEASGSVE VTHSNDGSGI GAALLAASHS LYLEDS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)