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AT4G27500.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
endoplasmic reticulum 0.500
plasma membrane 0.500
ASURE: endoplasmic reticulum,plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:22550958 (2012): plastid
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:20374526 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16618929 (2006): endoplasmic reticulum
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : proton pump interactor 1
Curator
Summary (TAIR10)
interacts with H+-ATPase, and regulates its activity
Computational
Description (TAIR10)
proton pump interactor 1 (PPI1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of proton transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 56187 Blast hits to 35171 proteins in 2461 species: Archae - 533; Bacteria - 11472; Metazoa - 20772; Fungi - 6196; Plants - 2564; Viruses - 257; Other Eukaryotes - 14393 (source: NCBI BLink).
Protein Annotations
BioGrid:14146eggNOG:ENOG410IHF8eggNOG:ENOG4111QP9EMBL:AJ002020
EMBL:AK316706EMBL:AL078467EMBL:AL161571EMBL:AY050365
EMBL:AY143914EMBL:CP002687EnsemblPlants:AT4G27500EnsemblPlants:AT4G27500.1
entrez:828859GeneID:828859Genevisible:O23144GO:GO:0005783
GO:GO:0005789GO:GO:0005886GO:GO:0009506GO:GO:0010155
GO:GO:0016021Gramene:AT4G27500.1hmmpanther:PTHR32219hmmpanther:PTHR32219:SF2
HOGENOM:HOG000243080InParanoid:O23144IntAct:O23144InterPro:IPR029669
iPTMnet:O23144KEGG:ath:AT4G27500ncoils:CoilOMA:NDRMVHE
PANTHER:PTHR32219:SF2PaxDb:O23144Pfam:O23144PhylomeDB:O23144
PIR:T08942PRIDE:O23144PRO:PR:O23144ProMEX:O23144
ProteinModelPortal:O23144Proteomes:UP000006548RefSeq:NP_194480.2SMR:O23144
STRING:3702.AT4G27500.1TAIR:AT4G27500tair10-symbols:PPI1TMHMM:TMhelix
UniGene:At.3381UniGene:At.71321UniProt:O23144
Coordinates (TAIR10) chr4:+:13743614..13745900
Molecular Weight (calculated) 68883.00 Da
IEP (calculated) 9.62
GRAVY (calculated) -0.95
Length 612 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVEVVNSGG FEVAPAPFEG KPEKNGKLDQ GKGDDAPINF GSVGELPKNA EENNNKVVNS DAPKNAAEEW PVAKQIHSFY LVKYRSYADP KIKAKLDLAD
101: KELEKLNKAR TGVLDKLRAK RAERSELFDL LDPLKSERKG FNTMFDEKRK EMEPLQQALG KLRSNDGGSA RGPAICSSEE ELNSMIYSYQ YRIQHESIPL
201: TEEKQILKEI RLLEGTRDKV IANAAMRAKI KESMGQKDDI QGQVKLMGAG LDGVKKERQA ISARINELSE KLKATKDEIT VLENELKTVS EKRDKAYSNI
301: HDLRRQRDET NSEYYQNRTV LNKARDLAAQ KNISELEALA NAEVEKFISL WCSKKNFRED YEKRILQSLD SRQLSRDGRM RNPDEKPLIA PEAAPSKATP
401: SETEVVPKAK AKPQPKEEPV SAPKPDATVA QNTEKAKDAV KVKNVADDDD DEVYGLGKPQ KEEKPVDAAT AKEMRKQEEI AKAKQAMERK KKLAEKAAAK
501: AAIRAQKEAE KKEKKEQEKK AKKKTGGNTE TETEEVPEAS EEEIEAPVQE EKPQKEKVFK EKPIRNRTRG RGPETIPRAI LKRKKSTNYW VYAAPAALVV
601: LLLLVLGYYY VL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)